Pairwise Alignments

Query, 137 a.a., DNA-binding protein H-NS from Vibrio cholerae E7946 ATCC 55056

Subject, 133 a.a., DNA binding protein, nucleoid-associated from Klebsiella michiganensis M5al

 Score =  112 bits (279), Expect = 3e-30
 Identities = 63/135 (46%), Positives = 82/135 (60%), Gaps = 2/135 (1%)

Query: 3   MSEITKTLLNIRSLRAYARELTIEQLEEALDKLTTVVQERKEAEAEEIAARAEQEAKLAA 62
           MS + + L NIRSLRA +RE +I+ LE+ L KL TV +E++  E    A RAE + KL  
Sbjct: 1   MSLLLEKLNNIRSLRAMSREFSIDVLEDMLAKLRTVTEEKRAEEQAAQALRAEHQEKLNT 60

Query: 63  IAEQIAKDGIDLEALISALSGETKTKAKGKRAPRPAKYKYIDTNGEEKTWTGQGRTPSVI 122
             E +  DGI  E L+   S  +K     KR PRP KY++ D  G EKTWTGQGR P  +
Sbjct: 61  WLELMIADGITPEQLVGHNSASSK--GNKKRQPRPPKYRFTDHTGAEKTWTGQGRMPKPL 118

Query: 123 QKALDEGKSLEEFAL 137
            KA+ EGKSL+ F +
Sbjct: 119 AKAVAEGKSLDSFLI 133