Pairwise Alignments

Query, 372 a.a., tRNA 2-thiouridine(34) synthase MnmA from Vibrio cholerae E7946 ATCC 55056

Subject, 381 a.a., tRNA-specific 2-thiouridylase MnmA from Phaeobacter inhibens DSM 17395

 Score =  208 bits (529), Expect = 2e-58
 Identities = 128/369 (34%), Positives = 201/369 (54%), Gaps = 20/369 (5%)

Query: 10  SQKKVIVGMSGGVDSSVSAYLLKQQGYQVEGLFMKNWEEDD---NEEYCTAAEDLADAQA 66
           ++ +V+V MSGGVDSSV A  L  +GY V G+ ++ ++       +  C A  D+ DA+ 
Sbjct: 19  AETRVVVAMSGGVDSSVVAAHLADEGYDVVGVTLQLYDHGAALAKKGACCAGIDIHDARR 78

Query: 67  VCDKLGIPLHTINFAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLEFADEVLD 126
           V ++ G P + +++   + D V + F   Y AG TP P I CN+ +KFK  LE A + L+
Sbjct: 79  VAEERGFPHYVLDYENIFKDAVIDEFADSYLAGATPVPCIRCNERVKFKDLLETARD-LE 137

Query: 127 ADYIAMGHYVRRTFPQNGEKPQMLRGLDGNKDQSYFLYTLSHEQVARTLFPVGEL-EKPE 185
           AD +A GHY++R    NG  P++    D N+DQSYFL++ + EQ+    FP+G L  K  
Sbjct: 138 ADCMATGHYIQRKDGPNG--PELHSAEDANRDQSYFLFSTTPEQLDYLRFPLGHLPSKDA 195

Query: 186 VRRIAEEQGLITAKKKDSTGICFIGERKFTDFLSRYLP--AQPGKIETPEGKVIGEHQGL 243
            R +A + GL  A K DS  ICF+    +   + +  P  A+PG+I   +G+V+G H G+
Sbjct: 196 TREMASQYGLAVADKPDSQDICFVPNGDYASVIEKLRPGAAEPGEIVHSDGRVLGTHDGV 255

Query: 244 MYHTLGQRKGLHIGGMKESSEQPWYVADKDLKRNVLIAVQGADHPLLKSHGLVAAQLHWV 303
           +++T+GQR+GL IGG+ E    P YV   D+    ++        LL +  +   +++W+
Sbjct: 256 IHYTIGQRRGLGIGGLSE----PLYVVKLDVDTKQVVV---GPKELLATRTIPVREINWL 308

Query: 304 DRTPIT--EPVRCSVKTRYRQSDIACTIIPLSDDRIKVMFDEPQVAVTPGQSAVFY--QG 359
              P T  +     VK R  +      I P+S+   +V    P+  ++PGQ+ VFY  +G
Sbjct: 309 GDEPFTSRDEWHLKVKVRSTRPPRDAIIRPISETEAEVELLTPEEGISPGQACVFYAEEG 368

Query: 360 EICLGGGII 368
               GGG I
Sbjct: 369 SRIFGGGWI 377