Pairwise Alignments

Query, 372 a.a., tRNA 2-thiouridine(34) synthase MnmA from Vibrio cholerae E7946 ATCC 55056

Subject, 351 a.a., putative tRNA (5-methylaminomethyl-2-thiouridylate) methyltransferase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  199 bits (506), Expect = 1e-55
 Identities = 125/357 (35%), Positives = 189/357 (52%), Gaps = 29/357 (8%)

Query: 18  MSGGVDSSVSAYLLKQQGYQVEGLFMKNWEEDDNEEYCTAAEDLADAQAVCDKLGIPLHT 77
           MSGG+DS+ +  +L++QGY++ G+ M+ W ++             DA+ +  ++GI  + 
Sbjct: 1   MSGGIDSTATCLMLQEQGYEIVGVTMRVWGDEPQ-----------DARELAARMGIEHYV 49

Query: 78  INFAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLEFADEVLDADYIAMGHYVR 137
            +    + + + + F+ EYK GRTPNP ++CN   KF+   E+AD+ LD  YIA GHY R
Sbjct: 50  ADERIPFKETIVKNFIDEYKQGRTPNPCVMCNPLFKFRVLAEWADK-LDCAYIATGHYSR 108

Query: 138 RTFPQNGEKPQMLRGLDGNKDQSYFLYTLSHEQVARTLFPVGELEKPEVRRIAEEQGL-I 196
               +      ++ G D  KDQSYFL+ L  + + R +FP+G+  K +VR    E+G   
Sbjct: 109 --LEERSGHIYIVAGDDDKKDQSYFLWRLGQDILKRCIFPLGDYTKIKVREYLAEKGYEA 166

Query: 197 TAKKKDSTGICFIGERKFTDFLSRYLPAQ-----PGKIETPEGKVIGEHQGLMYHTLGQR 251
            +K+ +S  +CFI +  + DFL    P       PG     EG  +G+H+G  Y+T+GQR
Sbjct: 167 KSKEGESMEVCFI-QGDYRDFLREQCPELDTEIGPGWFVNSEGVKLGQHKGAPYYTIGQR 225

Query: 252 KGLHIGGMKESSEQPWYVADKDLKRNVLIAVQGADHPLLKSHGLVAAQLHWVDRTPITEP 311
           KGL I   K     P YV   + ++N ++     D   L++  ++A Q   VD   +   
Sbjct: 226 KGLEIALGK-----PAYVLKINPQKNTVML---GDAEQLQTEYMLAEQDRIVDEQELFSC 277

Query: 312 VRCSVKTRYRQSDIACTIIPLSDDRIKVMFDEPQVAVTPGQSAVFYQGEICLGGGII 368
              +V+ RYR   I C +  L D R+ V F E   AV PGQSAVFY G   LGG  I
Sbjct: 278 ENLAVRIRYRSRPIPCRVKRLEDGRLLVRFRETASAVAPGQSAVFYDGRRVLGGAFI 334