Pairwise Alignments

Query, 372 a.a., tRNA 2-thiouridine(34) synthase MnmA from Vibrio cholerae E7946 ATCC 55056

Subject, 370 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  176 bits (446), Expect = 9e-49
 Identities = 123/383 (32%), Positives = 194/383 (50%), Gaps = 42/383 (10%)

Query: 12  KKVIVGMSGGVDSSVSAYLLKQQGYQVEGLFMKNWEEDDNEEYCTAAEDLADAQAVCDKL 71
           K+V++GMSGG DSSV+A  L + GY+V G+  + +E +D+ EY      L DA+ + ++L
Sbjct: 6   KRVLLGMSGGTDSSVAAMRLLEAGYEVTGVTFRFYELNDSTEY------LEDARHLAERL 59

Query: 72  GIPLHTINFAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLEFADEVLDADYIA 131
           GI   T +    +   + EYF+ EY  G TP P  LCN  +K+    + ADE +   YIA
Sbjct: 60  GIRHITYDAREIFRKQIIEYFVHEYMVGHTPVPCTLCNNYLKWPLLSKIADE-MGIFYIA 118

Query: 132 MGHYVRRTFPQNGEKPQMLRGLDGNKDQSYFLYTLSHEQVARTLFPVGELEKPEVRRIAE 191
            GHYVR+   +  +   +    D +KDQ++FL+ L  + + R L P+G++ K E R  A 
Sbjct: 119 TGHYVRKV--KVDDTCYITYAADSDKDQTFFLWGLKQDILRRMLLPMGDITKVEARAFAA 176

Query: 192 EQGLI-TAKKKDSTGICFIGERKFTDFLSRYLPA---------QP--------------G 227
           E+G    A K+DS G+CF     +  FL  +L +         QP              G
Sbjct: 177 ERGFQKVAVKRDSLGVCFC-PMDYRSFLKMWLVSNCQPQVSVGQPQVSAGQTWSAEVRRG 235

Query: 228 KIETPEGKVIGEHQGLMYHTLGQRKGLHIGGMKESSEQPWYVADKDLKRNVLIAVQGADH 287
           +    +G  I  H+G  ++T+GQR+GL I        +  +V +   ++N ++    A  
Sbjct: 236 RFVDEKGDFIAWHEGYPFYTVGQRRGLGI-----HLNRAVFVKEIRPEKNEVVL---ASL 287

Query: 288 PLLKSHGLVAAQLHWVDRTPITEPVRCSVKTRYRQSDIACTIIPLSDDRIKVMFDEPQVA 347
             L+   ++    + V+R  +       VK RYR+ +  CT+    D+ + V   EP  A
Sbjct: 288 QALEKTEMLLKDWNIVNRERLLGHADIIVKIRYRKQENHCTVTVTLDNFLHVQLHEPLTA 347

Query: 348 VTPGQSAVFYQGEICLGGGIIEE 370
           +  GQ+A FY+  + LGGGII E
Sbjct: 348 IASGQAAAFYKDGLLLGGGIIVE 370