Pairwise Alignments

Query, 372 a.a., tRNA 2-thiouridine(34) synthase MnmA from Vibrio cholerae E7946 ATCC 55056

Subject, 355 a.a., putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  207 bits (528), Expect = 3e-58
 Identities = 124/357 (34%), Positives = 189/357 (52%), Gaps = 16/357 (4%)

Query: 18  MSGGVDSSVSAYLLKQQGYQVEGLFMKNWEEDDNEEYCTAAEDLADAQAVCDKLGIPLHT 77
           +SGGVDSSV  +LL +QGY+    ++K   +      C+A ED+  + A+  K G+ L  
Sbjct: 7   LSGGVDSSVVVHLLCEQGYKPTLFYIKIGMDGAEYMDCSAEEDIEMSTAIARKYGLSLEV 66

Query: 78  INFAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLEFADEVLDADYIAMGHYVR 137
           ++   EYW+NV  Y + + K G TPNPD++CNK IKF  F +   +  + D+ A GHY  
Sbjct: 67  VDLHKEYWENVAAYAIDKIKKGLTPNPDVMCNKLIKFGCFEQQVGK--NFDFTATGHYA- 123

Query: 138 RTFPQNGEKPQMLRGLDGNKDQSYFLYTLSHEQVARTLFPVGELEKPEVRRIAEEQGLIT 197
            T  Q+G K  +    D  KDQ+ FL  + + QV++ +FP+G L K EVR IA   GL +
Sbjct: 124 TTIRQDG-KTWLGTAKDPVKDQTDFLAQIDYLQVSKLMFPIGGLMKQEVREIASRAGLPS 182

Query: 198 AKKKDSTGICFIGERKFTDFLSRYLPAQPGK-IETPEGKVIGEHQGLMYHTLGQRKGLHI 256
           A++KDS GICF+G+  + DF+ R+L  + G  IE   GK +G H+G  +HT+GQRKGL +
Sbjct: 183 ARRKDSQGICFLGKINYNDFVRRFLGEREGAIIELETGKKVGTHRGYWFHTIGQRKGLGL 242

Query: 257 GGMKESSEQPWYVADKDLKRNVLIAVQGADHPLLKSHGLVAAQLHWVDRTP---ITEPVR 313
            G       PW+V  KD++ N++    G                H++   P     + + 
Sbjct: 243 SG------GPWFVIKKDVEENIIYVSHGYGVETQFGSEFRINDFHFITENPWKDAGKEID 296

Query: 314 CSVKTRYRQSDIACTIIPLSDDRIKVMFDEPQVAVTPGQSAVFYQGE--ICLGGGII 368
            + K R+        ++     + +++  E    + PGQ  V Y  E  IC+G G I
Sbjct: 297 ITFKIRHTPEFTKGKLVQEEGGQFRILSSEKLQGIAPGQFGVIYDEEAGICVGSGEI 353