Pairwise Alignments

Query, 269 a.a., DUF1365 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 263 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  155 bits (391), Expect = 1e-42
 Identities = 93/273 (34%), Positives = 142/273 (52%), Gaps = 33/273 (12%)

Query: 8   TEWQSCLMVGQVRHRRFTPVEHALNYPLFMPCIDLDEWPQLADKVWGLGERWWHWARFRR 67
           ++ +S +  G V H RF P++H  +Y + +  IDLDE   ++        +     RF  
Sbjct: 2   SQLKSGIYYGTVTHSRFMPIKHHFSYEMALLAIDLDEVDSISRMGRIFASQRRALLRFNP 61

Query: 68  EDYL------------------GQGPLKQAVLDKIEQLTGERIEGGRVVALLHLRYLGIY 109
            DYL                      LK  VL ++ +L GE+    RV+ +  +R+ G+Y
Sbjct: 62  ADYLTTFTSKDNLSRKLDVEEPSASALKSRVLQQVAELGGEK-RCNRVLFVGQIRHFGVY 120

Query: 110 FSPVNFYYVYDSEKRWRYLLAEVSNTPWNERHYYAVPAQAALTSEEAAVIEWQHAKAFHV 169
           FSPVNFY+ Y ++    Y+LAEVSNTPW++RH Y V    + T++          K FHV
Sbjct: 121 FSPVNFYFCYQNQIPL-YMLAEVSNTPWDQRHCYLVDLSVSNTTD----------KVFHV 169

Query: 170 SPFNPIEQRYCWKIKPLTRALMIHLEC---HRSNKEFDATLAMQAEPLSASNLLPRLIKT 226
           SPF  ++ RY W ++P +  L I +E    H   + F+ATL+M  + ++A++L   L + 
Sbjct: 170 SPFMDLDMRYKWHVEPPSERLNIGIENLPNHSGKRLFNATLSMSRQEINAASLRTLLFRF 229

Query: 227 PIMAVKVVLGIYWHAFKLWRKGAPFYAHPDQTQ 259
           P M +K+  GIYW A KL+ K  PF  HP Q +
Sbjct: 230 PFMTLKIFGGIYWQALKLFYKRVPFVPHPAQME 262