Pairwise Alignments

Query, 241 a.a., short-chain dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 268 a.a., short chain dehydrogenase (RefSeq) from Shewanella loihica PV-4

 Score = 67.8 bits (164), Expect = 2e-16
 Identities = 64/223 (28%), Positives = 102/223 (45%), Gaps = 23/223 (10%)

Query: 4   VFITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDSLH---TQYANIFPLAF--DVTDH 58
           V ITGA+ GIG+ LA   A  G +++   R+Q  L SL    +  A++ PL    DVTD 
Sbjct: 9   VIITGASEGIGRALAKAMAPLGCRLVLTARSQGRLHSLQQELSSIASVPPLVIPADVTDA 68

Query: 59  PGTK----AALAQLPCQPELWILNAGDCEYID-DGKMDVTLMARVFNINVLGVAAVIEGI 113
              +    A +A    + ++ + NAG   +   D   D++++ RV  +N L  A +    
Sbjct: 69  AACQGLIDACVAHFD-RLDILVNNAGMTMWSRFDELEDLSILERVMQVNYLAPAMLTHFA 127

Query: 114 QPHLSCGH-RVAIVGSIASELALPRAEAYGASKAAVAYLARTLQLDWRPLGIEVTTIFPG 172
            PHL     ++ +V S+A    +P    Y ASK AV     +L+++     + VT I P 
Sbjct: 128 LPHLKASRGQIVVVASVAGLTGVPTRSGYSASKHAVMGFFDSLRIELVEHDVAVTHICPD 187

Query: 173 FVATPLTDR-----------NTFAMPMIITVERAAQEIKAGLA 204
           FV + +  R           +      IIT E+ AQ +   +A
Sbjct: 188 FVVSEIHKRALDGQGNPLGKSPMQEAKIITAEQCAQMMLPAIA 230