Pairwise Alignments

Query, 241 a.a., short-chain dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 240 a.a., short-chain dehydrogenase/reductase SDR (RefSeq) from Shewanella loihica PV-4

 Score =  214 bits (545), Expect = 1e-60
 Identities = 119/239 (49%), Positives = 155/239 (64%), Gaps = 2/239 (0%)

Query: 4   VFITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDSLHTQYANIFPLAFDVTDHPGTKA 63
           + ITGATSGIGKQLAL YAK G +VIACGR+Q+ LD+L     NI  L FD+  +  +  
Sbjct: 3   LMITGATSGIGKQLALGYAKAGHKVIACGRSQTKLDALAEAQPNISTLCFDLMQYD-SYP 61

Query: 64  ALAQLPCQPELWILNAGDCEYIDDG-KMDVTLMARVFNINVLGVAAVIEGIQPHLSCGHR 122
           ALA      +L ILNAGDCEYIDD    D     ++ NIN++ +   ++   P+L  G R
Sbjct: 62  ALAADHGPLDLLILNAGDCEYIDDALNFDAKRFDKIININLIAIGYALQAWLPNLKPGGR 121

Query: 123 VAIVGSIASELALPRAEAYGASKAAVAYLARTLQLDWRPLGIEVTTIFPGFVATPLTDRN 182
           + +V S A  LALPRAEAYGASKA ++YLA+ L +D     IEVT + PGFV TPLTDRN
Sbjct: 122 LVLVSSSAQLLALPRAEAYGASKAGLSYLAKVLAIDLAKHQIEVTLVHPGFVQTPLTDRN 181

Query: 183 TFAMPMIITVERAAQEIKAGLARGVSQLYFPKRFTWLIRLLGALPYAWQGRLVRRLLKA 241
           TFAMPM+I  E AA  I  G+A+G   + FP+ F WL++ L  LP++   RL  R++ +
Sbjct: 182 TFAMPMMIGAEEAALTIMRGIAKGKRDIRFPRLFIWLMQSLSLLPFSLWRRLAMRMVSS 240