Pairwise Alignments

Query, 241 a.a., short-chain dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 266 a.a., oxidoreductase, short-chain dehydrogenase/reductase family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  191 bits (484), Expect = 2e-53
 Identities = 111/246 (45%), Positives = 149/246 (60%), Gaps = 10/246 (4%)

Query: 1   MTAVFITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDSL-HTQYANIFPLAFDVTDHP 59
           +  V +TGA+SGIG QLA DY   GW VIACGR+ + LD L  T+      L+FDVTD  
Sbjct: 9   INTVLVTGASSGIGLQLAKDYLALGWHVIACGRDATKLDLLAQTELIGATCLSFDVTDRL 68

Query: 60  GTKAALAQL-------PCQPELWILNAGDCEYIDDGK-MDVTLMARVFNINVLGVAAVIE 111
             +   ++L        C  ++ ILNAG CEYIDD K  D  L  RV + N++ +   + 
Sbjct: 69  QVQQTASELGDMLSSSECLLDVVILNAGSCEYIDDAKHFDDQLFERVIHTNLIAMGYCLG 128

Query: 112 GIQPHLSCGHRVAIVGSIASELALPRAEAYGASKAAVAYLARTLQLDWRPLGIEVTTIFP 171
              P +    ++A++ S A  L  PRAEAYGASKA V YLA +L LD     I V+ I P
Sbjct: 129 AFLPLMPKSAQLALMSSSAIYLPFPRAEAYGASKAGVKYLAASLSLDLAQDNIGVSVICP 188

Query: 172 GFVATPLTDRNTFAMPMIITVERAAQEIKAGLARGVSQLYFPKRFTWLIRLLGALP-YAW 230
           GFVATPLT +N FAMPM I V  A+  I+ G+ RG ++++FPKRFT+L++L+  LP + W
Sbjct: 189 GFVATPLTAKNDFAMPMQIDVHEASLAIRVGIERGDAEIHFPKRFTYLLKLMSFLPAFVW 248

Query: 231 QGRLVR 236
           Q  + R
Sbjct: 249 QKMIQR 254