Pairwise Alignments

Query, 241 a.a., short-chain dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 267 a.a., oxidoreductase, short chain dehydrogenase/reductase family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 68.2 bits (165), Expect = 2e-16
 Identities = 57/188 (30%), Positives = 92/188 (48%), Gaps = 11/188 (5%)

Query: 4   VFITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDSLHTQYANIFPLAF----DVTDHP 59
           V ITGA+ GIG+ LA+  A+ G Q++   RN++ L SL  + AN  P  F    DV+   
Sbjct: 9   VIITGASEGIGRALAIAMARIGCQLVLSARNETRLASLALEVANYGPTPFVFAADVSSAS 68

Query: 60  GTK----AALAQLPCQPELWILNAGDCEYID-DGKMDVTLMARVFNINVLGVAAVIEGIQ 114
             +    A +A    + ++ + NAG   +   D    ++++  +  +N LG A +     
Sbjct: 69  QCEDLIHATIAHYG-RIDILVNNAGMTMWSRFDELTQLSVLEDIMRVNYLGPAYLTHAAL 127

Query: 115 PHL-SCGHRVAIVGSIASELALPRAEAYGASKAAVAYLARTLQLDWRPLGIEVTTIFPGF 173
           P+L S   +V IV S+A    +P    Y ASK AV     +L+++     + VT I P F
Sbjct: 128 PYLKSSQGQVVIVASVAGLTGVPTRSGYAASKHAVIGFFDSLRIELADDNVAVTVICPDF 187

Query: 174 VATPLTDR 181
           V + +  R
Sbjct: 188 VVSQIHKR 195