Pairwise Alignments

Query, 241 a.a., short-chain dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 256 a.a., putative short-chain dehydrogenase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 87.8 bits (216), Expect = 2e-22
 Identities = 69/193 (35%), Positives = 97/193 (50%), Gaps = 23/193 (11%)

Query: 4   VFITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDSLHTQY-----ANIFPLAFDVTDH 58
           VFITGA+SGIG+  A  +AK+GW +I   R  S L+ L  +        ++ L FDV D 
Sbjct: 6   VFITGASSGIGEGCARKFAKEGWNLILNARTVSKLEELKAELEKEYGIQVYVLPFDVRDR 65

Query: 59  PGTKAALAQLPCQPELW------ILNAGDCEYID---DGKMDVTLMARVFNINVLGVAAV 109
              K A A L   PE W      I NAG    +D   +G +D   +  + + N+ G+ A+
Sbjct: 66  ---KQAAAALEALPEEWKSIDVLINNAGLVIGVDKEFEGSLDEWDI--MIDTNIRGLLAM 120

Query: 110 IEGIQPHL---SCGHRVAIVGSIASELALPRAEAYGASKAAVAYLARTLQLDWRPLGIEV 166
              + P +    CGH +  +GSIA + A P    Y A+KAAV  L+  L++D     + V
Sbjct: 121 TRLVVPGMVERGCGH-IINIGSIAGDAAYPGGSVYCATKAAVKALSDGLRIDLVDTPLRV 179

Query: 167 TTIFPGFVATPLT 179
           T I PG V T  T
Sbjct: 180 TNIKPGMVETNFT 192