Pairwise Alignments

Query, 435 a.a., serine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., Seryl-tRNA synthetase (EC 6.1.1.11) from Pseudomonas fluorescens FW300-N2E2

 Score =  518 bits (1333), Expect = e-151
 Identities = 264/435 (60%), Positives = 317/435 (72%), Gaps = 9/435 (2%)

Query: 1   MLDSKLLRTELDETAAKLARRGFKLDVETIRTLEEQRKSIQVEVENLQSTRNSISKQIGQ 60
           MLDSKLLR+ L + A +LA RGF LDV  I  LEEQRK++Q   E LQ+ RN+ SK IGQ
Sbjct: 1   MLDSKLLRSNLQDVADRLASRGFALDVARIEALEEQRKTVQTRTEALQAERNARSKSIGQ 60

Query: 61  LMASGDKAGAEAVKQQIGTLGDDLDAKKVELDAVMAQLDAITQTVPNIPDDAVPNGKDDS 120
               G+      +   +  +  +L A KVELDA+  +LD+I   +PN+P ++VP G+D+ 
Sbjct: 61  AKQRGEDIAP--LMADVERMAGELSAGKVELDAIQTELDSILLGIPNLPHESVPVGEDED 118

Query: 121 ENVEVSRWGTPKTYDFEVKDHVDLGEMGDGLDFASATKITGARFVVMKGQFARLHRAIAQ 180
            NVEV RWGTP T+DF V+DHV LGE    LDF +A K++GARF +++G  ARLHRA+AQ
Sbjct: 119 GNVEVRRWGTPTTFDFPVQDHVALGEKFGWLDFETAAKLSGARFALLRGPIARLHRALAQ 178

Query: 181 FMLDLHTDQHGYTELYVPYLVNAETLFGTGQLPKFGQDLFHTEPLTEKASDEEPRRLSLI 240
           FM++LH  +HGY E Y PYLV A  L GTGQLPKF +DLF       K S E    L LI
Sbjct: 179 FMINLHVTEHGYEEAYTPYLVQAPALQGTGQLPKFEEDLF-------KISREGEADLYLI 231

Query: 241 PTAEVPVTNLVRDTILDEAELPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI 300
           PTAEV +TN+V   I+D  +LP+K  AHTPCFRSEAG+ GRDTRG+IR HQFDKVE+VQI
Sbjct: 232 PTAEVSLTNIVAGEIVDAKQLPIKFVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQI 291

Query: 301 TRPEDSMAALEELTGHAEKVLQLLELPYRKVILCTGDMGFGSCKTYDLEVWVPAQKTYRE 360
             P  SM ALE LT +AEKVLQLLELPYR + LCTGDMGF + KTYDLEVW+P+Q  YRE
Sbjct: 292 VEPSKSMEALESLTANAEKVLQLLELPYRTLALCTGDMGFSAVKTYDLEVWIPSQDKYRE 351

Query: 361 ISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENYQEADGRIAI 420
           ISSCSN  DFQARRMQARFR     KPELVHTLNGSGLAVGRT+VA+LENYQ+ADG I +
Sbjct: 352 ISSCSNCGDFQARRMQARFRNPETGKPELVHTLNGSGLAVGRTLVAVLENYQQADGSIRV 411

Query: 421 PAVLQKYMGGLTHIG 435
           P VL+ YMGG+  IG
Sbjct: 412 PEVLKPYMGGIEVIG 426