Pairwise Alignments

Query, 435 a.a., serine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., seryl-tRNA synthetase from Pseudomonas stutzeri RCH2

 Score =  528 bits (1361), Expect = e-154
 Identities = 266/435 (61%), Positives = 322/435 (74%), Gaps = 9/435 (2%)

Query: 1   MLDSKLLRTELDETAAKLARRGFKLDVETIRTLEEQRKSIQVEVENLQSTRNSISKQIGQ 60
           MLDSKL+RT+L + AA+LA RG++LDV  I  LE QRK++Q   E LQ+ RN+ SK IGQ
Sbjct: 1   MLDSKLVRTQLQDVAARLATRGYQLDVARIEALEAQRKTVQTRTEQLQAERNARSKSIGQ 60

Query: 61  LMASGDKAGAEAVKQQIGTLGDDLDAKKVELDAVMAQLDAITQTVPNIPDDAVPNGKDDS 120
               G+      +   +  +G +L++ K ELD + ++LD +  ++PN+P ++VP G D+ 
Sbjct: 61  AKQRGEDIAP--LLADVDRMGSELESGKQELDRIQSELDQLMLSIPNLPHESVPVGADED 118

Query: 121 ENVEVSRWGTPKTYDFEVKDHVDLGEMGDGLDFASATKITGARFVVMKGQFARLHRAIAQ 180
           ENVEV RWGTPKT+DF V+DHV LGE    LDF +A K++GARF +M+G  ARLHRA+AQ
Sbjct: 119 ENVEVRRWGTPKTFDFPVQDHVALGEQHGWLDFETAAKLSGARFALMRGPIARLHRALAQ 178

Query: 181 FMLDLHTDQHGYTELYVPYLVNAETLFGTGQLPKFGQDLFHTEPLTEKASDEEPRRLSLI 240
           FM+DLHT  HGY E Y PYLV A  L GTGQLPKF +DLF       K S E      LI
Sbjct: 179 FMIDLHTRDHGYEEAYTPYLVQAPALQGTGQLPKFEEDLF-------KISREGEADFYLI 231

Query: 241 PTAEVPVTNLVRDTILDEAELPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI 300
           PTAEV +TN+V   ILD  +LPLK  AHTPCFRSEAG+ GRDTRG+IR HQFDKVE+VQI
Sbjct: 232 PTAEVSLTNIVAGEILDAKQLPLKFVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQI 291

Query: 301 TRPEDSMAALEELTGHAEKVLQLLELPYRKVILCTGDMGFGSCKTYDLEVWVPAQKTYRE 360
             P  S  ALEELTG+AEKVLQLL+LPYR + LCTGDMGFG+ KTYDLEVWVP+Q  YRE
Sbjct: 292 VEPSKSFEALEELTGNAEKVLQLLQLPYRVLSLCTGDMGFGATKTYDLEVWVPSQDKYRE 351

Query: 361 ISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENYQEADGRIAI 420
           ISSCSN  DFQARRMQAR+R     KPELVHTLNGSGLAVGRT+VA+LENYQ+ADG + +
Sbjct: 352 ISSCSNCGDFQARRMQARYRNPETGKPELVHTLNGSGLAVGRTLVAVLENYQQADGSVVV 411

Query: 421 PAVLQKYMGGLTHIG 435
           P VL+ YMGG+  IG
Sbjct: 412 PEVLKPYMGGIDIIG 426