Pairwise Alignments

Query, 435 a.a., serine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., seryl-tRNA synthetase from Synechococcus elongatus PCC 7942

 Score =  378 bits (970), Expect = e-109
 Identities = 204/435 (46%), Positives = 277/435 (63%), Gaps = 22/435 (5%)

Query: 1   MLDSKLLRTELDETAAKLARRGFKLDVETIRTLEEQRKSIQVEVENLQSTRNSISKQIGQ 60
           +LD +LLR   + T A+L RR    D++ + +L++Q +  + E   LQ+  N I + +GQ
Sbjct: 16  VLDLRLLRENPEATQARLDRRHSSYDIQPLLSLDQQVRQWEQERTQLQARSNEIGRSVGQ 75

Query: 61  LMASGDKAGAEAVKQQIGTL---GDDLDAKKVELDA----VMAQLDAITQTVPNIPDDAV 113
            M    + GA+   ++I  L   G+ L  +  +L+     V ++LD    T+PN+PD+ V
Sbjct: 76  KM----REGADPQSEEIAALREEGNQLKQQIADLEQQERQVRSELDTYLLTLPNLPDETV 131

Query: 114 PNGKDDSENVEVSRWGTPKTYDFEVKDHVDLGEMGDGLDFASATKITGARFVVMKGQFAR 173
           P G  + EN E+ RWG  +  + E   H ++GE     DF  +T+I  +RFV + G  A 
Sbjct: 132 PLGSSEDENREIHRWGDDRIREGEFAPHWEIGERLGLFDFERSTRIAQSRFVTLLGAGAA 191

Query: 174 LHRAIAQFMLDLHTDQHGYTELYVPYLVNAETLFGTGQLPKFGQDLFHTEPLTEKASDEE 233
           L RA+  FMLD  T   GYTE+  PYL+N+ +L  +GQLPKF ++ F  +       D+ 
Sbjct: 192 LERALIAFMLDRQTAA-GYTEVAPPYLINSASLTASGQLPKFSEESFRCD------RDD- 243

Query: 234 PRRLSLIPTAEVPVTNLVRDTILDEAELPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 293
              L L PTAEVP+T+L RD IL   +LPL+  A+TPCFR EAGSYGRDTRGLIR+HQF+
Sbjct: 244 ---LWLTPTAEVPLTSLYRDEILSADQLPLRYCAYTPCFRREAGSYGRDTRGLIRLHQFN 300

Query: 294 KVELVQITRPEDSMAALEELTGHAEKVLQLLELPYRKVILCTGDMGFGSCKTYDLEVWVP 353
           KVEL Q   P+ S AA ++L  +AE +LQ LELPYR + LCTGD+GF + KTYD+EVW+P
Sbjct: 301 KVELYQFVHPDHSEAAHQQLLANAEAILQALELPYRTIELCTGDLGFSAQKTYDIEVWLP 360

Query: 354 AQKTYREISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENYQE 413
           +   YREISSCSN  DFQARR   RF+  G+K    VHTLNGSGLAVGRTM A+LENYQ+
Sbjct: 361 SAGRYREISSCSNCGDFQARRANIRFKEAGQKGTRFVHTLNGSGLAVGRTMAAVLENYQQ 420

Query: 414 ADGRIAIPAVLQKYM 428
            DG + +P  LQ Y+
Sbjct: 421 PDGSVRVPEALQPYL 435