Pairwise Alignments

Query, 435 a.a., serine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 428 a.a., seryl-tRNA synthetase (RefSeq) from Shewanella amazonensis SB2B

 Score =  596 bits (1537), Expect = e-175
 Identities = 289/435 (66%), Positives = 356/435 (81%), Gaps = 7/435 (1%)

Query: 1   MLDSKLLRTELDETAAKLARRGFKLDVETIRTLEEQRKSIQVEVENLQSTRNSISKQIGQ 60
           MLD+K LR EL+ T  +LA RGF LD++ ++ LEE+RKS+QV  E LQ++RN+ISK IGQ
Sbjct: 1   MLDTKYLRNELEFTKERLAARGFALDIDHLKALEEKRKSLQVATEELQASRNAISKSIGQ 60

Query: 61  LMASGDKAGAEAVKQQIGTLGDDLDAKKVELDAVMAQLDAITQTVPNIPDDAVPNGKDDS 120
             + G+      +  Q+G LG +L+AKK+EL A++ +++AI  +VPN+PD++VP GKD+S
Sbjct: 61  AKSRGEDVAP--IMAQVGNLGTELEAKKIELAALLEEINAIAMSVPNLPDESVPVGKDES 118

Query: 121 ENVEVSRWGTPKTYDFEVKDHVDLGEMGDGLDFASATKITGARFVVMKGQFARLHRAIAQ 180
           ENVE+ RWG P+++DF VKDHVDLGE   GLDF SA KITG+RF+VMKGQ AR+HRA+AQ
Sbjct: 119 ENVEIRRWGEPRSFDFAVKDHVDLGETLGGLDFKSAVKITGSRFIVMKGQIARMHRALAQ 178

Query: 181 FMLDLHTDQHGYTELYVPYLVNAETLFGTGQLPKFGQDLFHTEPLTEKASDEEPRRLSLI 240
           FMLDLHT +HGYTE YVP LVN ++L GTGQLPKF +DLF+ +P TE     E + LSLI
Sbjct: 179 FMLDLHTIEHGYTEAYVPLLVNTDSLLGTGQLPKFSEDLFNLKPATE-----EGQALSLI 233

Query: 241 PTAEVPVTNLVRDTILDEAELPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI 300
           PTAEVPVTNLVRDTILDEA+LP+K+TAHT CFRSEAGSYG+DTRGLIR HQFDKVE+VQI
Sbjct: 234 PTAEVPVTNLVRDTILDEADLPIKITAHTACFRSEAGSYGKDTRGLIRQHQFDKVEMVQI 293

Query: 301 TRPEDSMAALEELTGHAEKVLQLLELPYRKVILCTGDMGFGSCKTYDLEVWVPAQKTYRE 360
            +PE+SM ALE++ GHAE VL+ L LPYR V+LCTGDMGFG+ KTYD+EVW+PAQ TYRE
Sbjct: 294 VKPENSMDALEQMVGHAENVLKKLGLPYRTVVLCTGDMGFGAAKTYDIEVWLPAQNTYRE 353

Query: 361 ISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENYQEADGRIAI 420
           ISSCSN+ DFQARRMQAR+R K + KP LVHTLNGSGLAVGRT+VAILENYQ ADG + +
Sbjct: 354 ISSCSNVKDFQARRMQARYRSKEDNKPALVHTLNGSGLAVGRTLVAILENYQNADGTVTV 413

Query: 421 PAVLQKYMGGLTHIG 435
           P  L+ YMGG+  +G
Sbjct: 414 PEALRPYMGGIEQLG 428