Pairwise Alignments

Query, 435 a.a., serine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 428 a.a., seryl-tRNA synthetase (RefSeq) from Shewanella loihica PV-4

 Score =  600 bits (1548), Expect = e-176
 Identities = 294/435 (67%), Positives = 351/435 (80%), Gaps = 7/435 (1%)

Query: 1   MLDSKLLRTELDETAAKLARRGFKLDVETIRTLEEQRKSIQVEVENLQSTRNSISKQIGQ 60
           MLD K LRTEL+ TA +LA RGF LDV+ +  LEE+RKS+QV  E LQ++RN+ISK IGQ
Sbjct: 1   MLDPKFLRTELEATAERLATRGFILDVDRLSKLEEKRKSLQVATEELQASRNAISKSIGQ 60

Query: 61  LMASGDKAGAEAVKQQIGTLGDDLDAKKVELDAVMAQLDAITQTVPNIPDDAVPNGKDDS 120
             A G+      +  ++G LG +L +K+ EL  ++ +L+AI  +VPN+PD++ P G D++
Sbjct: 61  AKAKGEDVAP--IMAKVGDLGAELSSKEAELKQLLEELNAIAMSVPNLPDESAPIGADEN 118

Query: 121 ENVEVSRWGTPKTYDFEVKDHVDLGEMGDGLDFASATKITGARFVVMKGQFARLHRAIAQ 180
           +NVE+ RWG PK +DF+VKDHVDLGE   GLDF SA KITG+RF+VMKGQ AR+HRA+ Q
Sbjct: 119 DNVEIRRWGEPKQFDFDVKDHVDLGEQHAGLDFKSAVKITGSRFIVMKGQIARMHRALTQ 178

Query: 181 FMLDLHTDQHGYTELYVPYLVNAETLFGTGQLPKFGQDLFHTEPLTEKASDEEPRRLSLI 240
           FMLDLHT +HGYTE YVP LVN ++L GTGQLPKFG+DLFHT+P TE     E + LSLI
Sbjct: 179 FMLDLHTTEHGYTETYVPLLVNEDSLLGTGQLPKFGEDLFHTKPATE-----EGQGLSLI 233

Query: 241 PTAEVPVTNLVRDTILDEAELPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI 300
           PTAEVP+TNL RDTI+DE ELP+KMTAHT CFRSEAGSYGRDTRGLIR HQFDKVELVQ+
Sbjct: 234 PTAEVPLTNLARDTIIDEDELPIKMTAHTACFRSEAGSYGRDTRGLIRQHQFDKVELVQL 293

Query: 301 TRPEDSMAALEELTGHAEKVLQLLELPYRKVILCTGDMGFGSCKTYDLEVWVPAQKTYRE 360
            +PEDSMAALE LT HAE VLQ L LPYR V+LCTGDMGFG+ KT+D+EVW+PAQ TYRE
Sbjct: 294 VKPEDSMAALESLTQHAETVLQRLGLPYRTVVLCTGDMGFGAAKTFDIEVWLPAQNTYRE 353

Query: 361 ISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENYQEADGRIAI 420
           ISSCSNM DFQARRMQAR++ K  KKP L+HTLNGSGLAVGRT+VA+LENYQ ADG I +
Sbjct: 354 ISSCSNMQDFQARRMQARYKAKSAKKPALLHTLNGSGLAVGRTLVAVLENYQNADGSITV 413

Query: 421 PAVLQKYMGGLTHIG 435
           P  L+ YMGGLT IG
Sbjct: 414 PEALRPYMGGLTQIG 428