Pairwise Alignments

Query, 449 a.a., replication-associated recombination protein A from Vibrio cholerae E7946 ATCC 55056

Subject, 442 a.a., recombination factor protein RarA (RefSeq) from Shewanella amazonensis SB2B

 Score =  556 bits (1432), Expect = e-163
 Identities = 290/445 (65%), Positives = 337/445 (75%), Gaps = 5/445 (1%)

Query: 5   SLDFSGDEDFRPLAARMRPQTVEQYIGQQHILGPGKPLRRALEAGHIHSMILWGPPGTGK 64
           SL F    DF PLAARMRP +VE+YIGQ H+LG GKPLR+AL AG +HSM+LWGPPGTGK
Sbjct: 2   SLSFDFSPDFNPLAARMRPASVEEYIGQSHLLGEGKPLRQALLAGKVHSMLLWGPPGTGK 61

Query: 65  TTLAEVAANYANAEVERVSAVTSGVKEIRAAIEKARENKLS-GRRTILFVDEVHRFNKSQ 123
           TTLAE+ A YANA VER+SAVTSGVKEIRAAIE+A+    S G+RT+LFVDEVHRFNKSQ
Sbjct: 62  TTLAELVARYANAHVERISAVTSGVKEIRAAIEQAKNVAQSRGQRTLLFVDEVHRFNKSQ 121

Query: 124 QDAFLPHIEDGTVTFIGATTENPSFELNNALLSRARVYKLTSLNQQEILQALHQAIADTE 183
           QDAFLP IEDGTV FIGATTENPSFE+NNALLSR RVY +  L    I Q L QA +D  
Sbjct: 122 QDAFLPFIEDGTVIFIGATTENPSFEVNNALLSRCRVYLIKRLEDDAIGQILAQANSDEA 181

Query: 184 RGLGKVAAVFADNVLDRLAELVNGDARMSLNYLELLYDMAREDDQGRKQIDLPLLAEVAG 243
           RGLGK   +    +   +A L +GDAR +LN LEL+ D+  +  +     +L LL+EVAG
Sbjct: 182 RGLGKRGLLLKAELKSAIARLCDGDARKALNLLELMSDLLPDGGE----YNLELLSEVAG 237

Query: 244 EKVSRFDNKGDIWYDLISAVHKSIRGSDPDAALYWAARMISAGCDPLYIARRLLAIASED 303
            + + +D  GD +YDLISAVHKSIRGS PDAALYW  R++  G DPLY+ARRLLAIASED
Sbjct: 238 HQAAGYDKNGDQYYDLISAVHKSIRGSAPDAALYWFCRILEGGGDPLYVARRLLAIASED 297

Query: 304 VGNADPRGMQVALAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAWKQALSDAHN 363
           +GNADP  M VAL AWDCF RVGPAEGERAIAQA++YLA APKSNAVYTA+K A   A  
Sbjct: 298 IGNADPNAMTVALNAWDCFHRVGPAEGERAIAQAVIYLASAPKSNAVYTAFKAARVLARE 357

Query: 364 LPEFEVPPHLRNAPTRLMKDLGYGEEYRYAHDEPGAYAAGECYFPPEMSGTRYYQPTPRG 423
                VP HLRNAPT+LM +LG GE YRYAHDE GA+AAGE YFP  +  +R YQPT RG
Sbjct: 358 TGNAPVPNHLRNAPTKLMSELGVGEGYRYAHDEDGAFAAGENYFPEVLQHSRIYQPTARG 417

Query: 424 LETKIAEKLAYLADLNAKSPQKRYE 448
            E +I +KLA+L  LN +S +KRYE
Sbjct: 418 FEKRIRDKLAHLDALNQQSGRKRYE 442