Pairwise Alignments

Query, 449 a.a., replication-associated recombination protein A from Vibrio cholerae E7946 ATCC 55056

Subject, 1113 a.a., DNA polymerase III, subunits gamma and tau (RefSeq) from Shewanella loihica PV-4

 Score = 72.0 bits (175), Expect = 9e-17
 Identities = 82/314 (26%), Positives = 128/314 (40%), Gaps = 56/314 (17%)

Query: 14  FRPLAARMRPQTVEQYIGQQHILGPGKPLRRALEAGHIHSMILW-GPPGTGKTTLAEVAA 72
           ++ LA + RP T EQ +GQ H+L     L  AL    +H   L+ G  G GKT+LA + A
Sbjct: 3   YQVLARKWRPATFEQVVGQSHVL---HALTNALSQNRLHHAYLFTGTRGVGKTSLARLFA 59

Query: 73  NYANAE-------------------------VERVSAVTSGVKEIRAAIEKARENKLSGR 107
              N E                         +E  +A  + V + R  ++  +     GR
Sbjct: 60  KGLNCEQGVTATPCGQCASCVEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQYRPTRGR 119

Query: 108 RTILFVDEVHRFNKSQQDAFLPHIEDGT--VTFIGATTENPSFELNNALLSRARVYKLTS 165
             +  +DEVH  ++S  +A L  +E+    V F+ ATT+     L   +LSR   + L S
Sbjct: 120 FKVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQ--RLPVTVLSRCLQFNLKS 177

Query: 166 LNQQEILQALHQAIADTERGLGKVAAVFADNVLDRLAELVNGDARMSLNYLELLYDMARE 225
           L   EI   L   +A  + G       + D  +  LA+  NG  R +L+    L D A  
Sbjct: 178 LTLDEICVQLGHILAQEQVG-------YDDGAVKLLAKAANGSMRDALS----LTDQAIA 226

Query: 226 DDQGRKQIDLPLLAEVAGEKVSRFDNKGDIWYDLISAVHKSIRGSDPDAALYWAARMISA 285
              G  Q+ L  +  +           G I    +  + K++   D D  +     ++S 
Sbjct: 227 FGAG--QVRLTQVQTML----------GTIDEHHVIVLLKALCDGDVDLLMKVTGDVLSF 274

Query: 286 GCDPLYIARRLLAI 299
           G DP  + R LL +
Sbjct: 275 GADPHEVLRSLLEL 288