Pairwise Alignments

Query, 449 a.a., replication-associated recombination protein A from Vibrio cholerae E7946 ATCC 55056

Subject, 1002 a.a., DNA polymerase III, gamma and tau subunits (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 69.7 bits (169), Expect = 4e-16
 Identities = 65/229 (28%), Positives = 98/229 (42%), Gaps = 40/229 (17%)

Query: 14  FRPLAARMRPQTVEQYIGQQHILGPGKPLRRALEAGHIHSMILW-GPPGTGKTTLAEVAA 72
           ++ LA + RP T EQ +GQ H+L     L  AL    +H   L+ G  G GKT+LA + A
Sbjct: 3   YQVLARKWRPATFEQMVGQSHVL---HALTNALTQQRLHHAYLFTGTRGVGKTSLARLFA 59

Query: 73  NYANAE-------------------------VERVSAVTSGVKEIRAAIEKARENKLSGR 107
              N E                         +E  +A  + V + R  ++  +     GR
Sbjct: 60  KGLNCETGVTASPCGVCGSCVEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQYRPTRGR 119

Query: 108 RTILFVDEVHRFNKSQQDAFLPHIEDGT--VTFIGATTENPSFELNNALLSRARVYKLTS 165
             +  +DEVH  ++S  +A L  +E+    V F+ ATT+    +L   +LSR   + L S
Sbjct: 120 FKVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQ--KLPVTVLSRCLQFNLKS 177

Query: 166 LNQQEILQALHQAIADTERGLGKVAAVFADNVLDRLAELVNGDARMSLN 214
           L QQEI   L   +   +         F    L  LA+  NG  R +L+
Sbjct: 178 LTQQEIGTQLQHILTQEQ-------LPFEHEALGLLAKSANGSMRDALS 219