Pairwise Alignments

Query, 449 a.a., replication-associated recombination protein A from Vibrio cholerae E7946 ATCC 55056

Subject, 411 a.a., ATPase, AAA family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  276 bits (706), Expect = 9e-79
 Identities = 171/432 (39%), Positives = 239/432 (55%), Gaps = 29/432 (6%)

Query: 15  RPLAARMRPQTVEQYIGQQHILGPGKPLRRALEAGHIHSMILWGPPGTGKTTLAEVAANY 74
           +PL  R+RP  +E ++GQ H+    + +   L A  + S++L+GPPG GK+TLA + A  
Sbjct: 5   QPLPERLRPTVLEGFVGQTHLT---QRIEALLRANRLPSLLLFGPPGCGKSTLALLLAKA 61

Query: 75  ANAEVERVSAVTSGVKEIRAAIEKARENKLSGRRTILFVDEVHRFNKSQQDAFLPHIEDG 134
            +A V R+SA  +G++ +R  +             IL +DE+HRF+K+QQD FLP +E G
Sbjct: 62  RSANVLRLSAPEAGLQHLRKQLHGV---------DILVLDELHRFSKAQQDFFLPLLESG 112

Query: 135 TVTFIGATTENPSFELNNALLSRARVYKLTSLNQQEILQALHQAIADTERGLGKVAAVFA 194
            +T +  TTENPSF +   LLSR  V +L  L + E+L+          RG         
Sbjct: 113 DITMLATTTENPSFSVTRQLLSRLHVLRLRPLGRAELLEL-------GRRGAVAQEVQIE 165

Query: 195 DNVLDRLAELVNGDARMSLNYLELLYDMAREDDQGRKQIDLPLLAEVAGEKVSRFDNKGD 254
           D+VLD LA + +GDAR  LN LE  Y  A  +D+     D+  +     E VSR D  GD
Sbjct: 166 DDVLDLLASMSHGDARTMLNLLE--YVAALPEDKR----DIEGVRSAMPEIVSRHDKDGD 219

Query: 255 IWYDLISAVHKSIRGSDPDAALYWAARMISAGCDPLYIARRLLAIASEDVGNADPRGMQV 314
             Y+L SA+ KSIRGSDPDAALY+ A ++  G DP ++ RRL+  ASEDVG ADP+ + +
Sbjct: 220 NHYELASALIKSIRGSDPDAALYYLACLLEGGEDPRFVCRRLILSASEDVGLADPQALPL 279

Query: 315 ALAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAWKQALSDAHNLPEFEVPPHLR 374
           A+A       VG  EG   +AQ  V+LA A KSN+ Y A+  A  +        VP HLR
Sbjct: 280 AVACMQAVEYVGMPEGFIPMAQTTVHLALARKSNSTYAAYINAARELKTQGRKGVPLHLR 339

Query: 375 NAPTRLMKDLGYGEEYRYAHDEPGAYAAGECYFPPEMSGTRYYQPTPRGLETKIAEKLAY 434
           N  TRL K+ GYG+ YRY H  P  +   E Y P  +   R+Y P   G E +++   A+
Sbjct: 340 NPSTRLQKEWGYGKGYRYPHSYPEGWIEQE-YLPEGLEDRRFYAPRENGEEPRLS---AW 395

Query: 435 LADLNAKSPQKR 446
              L  + P +R
Sbjct: 396 WRKLQRQRPPRR 407