Pairwise Alignments

Query, 198 a.a., outer membrane lipoprotein carrier protein LolA from Vibrio cholerae E7946 ATCC 55056

Subject, 208 a.a., outer membrane lipoprotein carrier protein LolA (RefSeq) from Shewanella loihica PV-4

 Score =  120 bits (302), Expect = 1e-32
 Identities = 65/204 (31%), Positives = 110/204 (53%), Gaps = 8/204 (3%)

Query: 1   MNKWLALLFCSFSAIAAPKD------TLSERLAMSEGFSATFNQQVLSPEGKVILTGNGK 54
           M K L+ L C+   + A          L ++LA  +   A F+QQV     KVI  G G 
Sbjct: 1   MLKPLSQLVCALPLVVAASSYADDSAALKDKLAKLDNLKANFSQQVTDVNNKVIQQGTGT 60

Query: 55  VDIARPSLFRWETETPDENLLVSDGTTLWHFDPFVEQVTLYRAEEALEQTPFVLLTRNKA 114
             +A P+ F W    PDE+L+V+DG  +W ++PF E+V++    +A+  +P  LL     
Sbjct: 61  FALAVPNQFYWHLTQPDESLIVADGRDVWIYNPFAEEVSVLDFNQAINASPIALLVHRDD 120

Query: 115 SDWDAYHVEEKGDVFTLTPTALDSNQGRFQITISEKGVVQGFKVIEQDGQQSEFTFS-KV 173
           + W AY V+ + D + +TP A+D++    ++   ++  ++  K+ +Q G  S F  S + 
Sbjct: 121 ATWQAYQVKRQDDCYQITPKAVDASVTGVEVCFKDE-QLEVMKLTDQQGNLSVFNLSAQA 179

Query: 174 KQQKPNASVFNYKVPKGVEVDDQR 197
             +  +AS+F + VP+GV++DDQR
Sbjct: 180 PLKDADASLFQFTVPEGVDIDDQR 203