Pairwise Alignments

Query, 198 a.a., outer membrane lipoprotein carrier protein LolA from Vibrio cholerae E7946 ATCC 55056

Subject, 206 a.a., outer membrane lipoprotein carrier protein LolA (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  107 bits (267), Expect = 1e-28
 Identities = 61/194 (31%), Positives = 95/194 (48%), Gaps = 2/194 (1%)

Query: 5   LALLFCSFSAIAAPKDTLSERLAMSEGFSATFNQQVLSPEGKVILTGNGKVDIARPSLFR 64
           L+ L  S + +A     L E L  +E   A F Q V     KVI +G G   +A P+ F 
Sbjct: 10  LSPLLYSNAVLADDAKQLRETLTGTESLKADFKQTVTDVNKKVIQSGAGVFALAHPNQFY 69

Query: 65  WETETPDENLLVSDGTTLWHFDPFVEQVTLYRAEEALEQTPFVLLTRNKASDWDAYHVEE 124
           W    PDE+ +V+DG  LW ++PF E+V +    +A+  +P  LL     + W  Y V +
Sbjct: 70  WHLTAPDESKIVADGKDLWIYNPFAEEVVIMDFTQAITASPIALLVHRDDATWSQYAVTK 129

Query: 125 KGDVFTLTPTALDSNQGRFQITISEKGVVQGFKVIEQDGQQSEFTFSKVKQ-QKPNASVF 183
           K D + + P A D+      +  + KG +  F V++  G  S+F  S        + ++F
Sbjct: 130 KQDCYEIKPKATDAGISAVNVCFN-KGTLNKFNVLDDKGNLSQFDLSNQHSISTGDKALF 188

Query: 184 NYKVPKGVEVDDQR 197
            + +P  V+VDDQR
Sbjct: 189 KFVLPDNVDVDDQR 202