Pairwise Alignments

Query, 209 a.a., prepilin peptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 907 a.a., preprotein translocase subunit SecA (RefSeq) from Shewanella loihica PV-4

 Score = 47.8 bits (112), Expect = 7e-10
 Identities = 49/174 (28%), Positives = 86/174 (49%), Gaps = 18/174 (10%)

Query: 45  ELFTEQHQALLQPVTEQIHRQY------QLLKGNGYDLLALLAEHAPSRKQGLADFAEGF 98
           E++ + ++A  + V  Q+ RQ+      Q L G   + LA + +H    +QG+     G+
Sbjct: 741 EIWVKAYKAKEEMVGAQVLRQFEKAVMLQTLDGLWKEHLAAM-DHL---RQGI--HLRGY 794

Query: 99  MQLWPQVEPMWQQGAFADGSIRMLQALLTTLMLAIDEAQTQAQ--MREAGYEQVPALADL 156
            Q  P+ E  +++ +F +   +ML++L   ++  + + Q QAQ  + E    +    A +
Sbjct: 795 AQKNPKQE--YKRESF-ELFQQMLESLKHDVISILSKVQVQAQSDVEEMEERRRQEEAKV 851

Query: 157 IEQLNLMVHEVALAADEAM-LGAKAQSVNPFKGIGRNDACPCDSGKKFKQCCGQ 209
                    E  + A+EA  L A    V   + +GRND CPC SG+K+KQC G+
Sbjct: 852 RRDYQHAEAEALVGAEEAQALAATQPVVREGEKVGRNDPCPCGSGRKYKQCHGK 905