Pairwise Alignments

Query, 209 a.a., prepilin peptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 383 a.a., SecC motif-containing protein (RefSeq) from Shewanella loihica PV-4

 Score = 43.1 bits (100), Expect = 7e-09
 Identities = 42/167 (25%), Positives = 65/167 (38%), Gaps = 25/167 (14%)

Query: 58  VTEQIHRQYQLLKGNGYDLLALLAEHAPSRKQGLADFAEGFMQLWPQVEPMWQQGAFADG 117
           +T+++  Q Q   GNG       +E + +  + L DFA  +  LW Q        A  D 
Sbjct: 225 LTQELTAQIQSAIGNG-------SEASQAFIKLLNDFALDWQALWSQ---FGDDKAGWDA 274

Query: 118 SIRMLQALLTTL----MLAIDEAQTQAQMREAGYEQVPALADLIEQLNLM---------- 163
             R+ Q  L          + ++QT A          PA++  + Q+N            
Sbjct: 275 FHRLRQQTLAQAAPLEQQVMVDSQTSAMKILVHLIMGPAMSPELAQVNTAAPQPTSTPST 334

Query: 164 -VHEVALAADEAMLGAKAQSVNPFKGIGRNDACPCDSGKKFKQCCGQ 209
            +         +   +  +   P  G+ RN  CPC SGKK+KQC GQ
Sbjct: 335 PISSQTRPTPSSQAASAVKMPQPEPGLTRNSPCPCGSGKKYKQCHGQ 381