Pairwise Alignments

Query, 209 a.a., prepilin peptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 908 a.a., preprotein translocase, SecA subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 42.7 bits (99), Expect = 2e-08
 Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 18/105 (17%)

Query: 118 SIRMLQALLTTL----MLAIDEAQTQAQMREAGYEQVPALADLIEQLNLMVHEVALAADE 173
           S  + Q LL TL    +  + + Q QAQ   +  E++ A     E+   +  +   AA E
Sbjct: 807 SFELFQQLLNTLKHDVISVLSKVQVQAQ---SDVEEMEARRR--EEDAKIQRDYQHAAAE 861

Query: 174 AMLG---------AKAQSVNPFKGIGRNDACPCDSGKKFKQCCGQ 209
           A++G         A    +     +GRND CPC SG+K+KQC G+
Sbjct: 862 ALVGGSDEDDAIAAHTPMIRDGDKVGRNDPCPCGSGRKYKQCHGK 906