Pairwise Alignments

Query, 323 a.a., tRNA dihydrouridine(16) synthase DusC from Vibrio cholerae E7946 ATCC 55056

Subject, 337 a.a., putative TIM-barrel protein, nifR3 family from Pseudomonas stutzeri RCH2

 Score =  109 bits (273), Expect = 8e-29
 Identities = 83/263 (31%), Positives = 123/263 (46%), Gaps = 17/263 (6%)

Query: 3   VILGPMEGVLDHLMRDMLTQINDYDFCVTEFVRVVNLLLPDHVFYRLCPELQQGSKTPSG 62
           +IL PM GV D   R +  +           + V  +L  D   +       +       
Sbjct: 15  LILAPMAGVTDQPFRQLCRRFG-------AALVVSEMLTSDMRLWNSRKSRLRMPHADEP 67

Query: 63  VPVKVQLLGQDPHWMAENAIRAAELGAYGIDLNFGCPAKMVNQSKGGAALLQHPELIYQV 122
            P  VQ+ G DP  +A+ A R  ELGA  ID+N GCPAK V     G+AL++   L+ ++
Sbjct: 68  EPRSVQIAGGDPQMLADAARRNVELGAQIIDINMGCPAKKVCNKAAGSALMRDERLVGEI 127

Query: 123 VKACRDAVPAHIPVSAKIRLGWE-DPEDCFEIVDAVAQAKADELTVHARTKAGGYKASEI 181
           + A   AV   +PV+ KIR GW+   ++   +     QA    L VH RT+A  Y   E 
Sbjct: 128 LDAVVGAV--DVPVTLKIRTGWDRQNKNGLTVARIAEQAGIAALAVHGRTRADLY-TGEA 184

Query: 182 KWHYIDQIRQKCSIPLIANGEVWNYADGQACIQTTGVDSLMVCRGALNVPNLGNVVKHN- 240
           ++  I  I+Q  SIP+ ANG++ +       ++ TGVD L++ R A   P +   V+H  
Sbjct: 185 EYDTIAAIKQAVSIPVFANGDIDSPQKAAQVLRATGVDGLLIGRAAQGRPWIFREVEHYL 244

Query: 241 -----HAAMPWHEVVDLLLRYTQ 258
                 AA    E+ D LL + Q
Sbjct: 245 RTGELLAAPTLEEIEDTLLEHVQ 267