Pairwise Alignments

Query, 323 a.a., tRNA dihydrouridine(16) synthase DusC from Vibrio cholerae E7946 ATCC 55056

Subject, 323 a.a., tRNA-dihydrouridine synthase B (RefSeq) from Shewanella amazonensis SB2B

 Score =  115 bits (288), Expect = 1e-30
 Identities = 79/240 (32%), Positives = 126/240 (52%), Gaps = 13/240 (5%)

Query: 2   RVILGPMEGVLDHLMRDMLTQINDYDFCVTEFVRV-VNLLLPDHVFYRLCPELQQGSKTP 60
           ++I+ PM GV D   R++  +       V+E +     L   D    R+    ++G ++ 
Sbjct: 11  QLIVAPMAGVTDQAFRNLCLRYGAA-MAVSEMLSANPELWDTDKSRQRMAHSGEEGIRS- 68

Query: 61  SGVPVKVQLLGQDPHWMAENAIRAAELGAYGIDLNFGCPAKMVNQSKGGAALLQHPELIY 120
                 VQ+ G DP  MA  A    E GA  ID+N GCPAK VN+ + G+AL+Q+P+L+ 
Sbjct: 69  ------VQIAGADPEQMAWAARFNVEQGAQIIDINMGCPAKKVNKKQAGSALMQYPDLVE 122

Query: 121 QVVKACRDAVPAHIPVSAKIRLGWE-DPEDCFEIVDAVAQAKADELTVHARTKAGGYKAS 179
           Q+++A   AV   +PV+ KIR GWE +  +  +I           L VH RT+   YK +
Sbjct: 123 QILRAVVGAV--EVPVTLKIRTGWEPEHRNGVQIARIAEDCGIASLAVHGRTRQCMYKGN 180

Query: 180 EIKWHYIDQIRQKCSIPLIANGEVWNYADGQACIQTTGVDSLMVCRGALNVPNLGNVVKH 239
             ++  I  I+Q  SIP++ANG++ +    +  +  TG D+LM+ RGA   P +   ++H
Sbjct: 181 -AEYDTIRAIKQSVSIPVVANGDIVSPEKARFVLDYTGADALMIGRGAQGRPWIFREIQH 239