Pairwise Alignments

Query, 323 a.a., tRNA dihydrouridine(16) synthase DusC from Vibrio cholerae E7946 ATCC 55056

Subject, 322 a.a., NifR3/Smm1 family protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  345 bits (884), Expect = 1e-99
 Identities = 169/307 (55%), Positives = 219/307 (71%), Gaps = 2/307 (0%)

Query: 1   MRVILGPMEGVLDHLMRDMLTQINDYDFCVTEFVRVVNLLLPDHVFYRLCPELQQGSKTP 60
           +R+IL PMEGVLDHLMR++L+ IN YD  VTEFVRVV+ LLP+ V+YRLCPEL+    T 
Sbjct: 6   LRIILAPMEGVLDHLMRELLSSINPYDLLVTEFVRVVDQLLPEKVYYRLCPELKNNGLTK 65

Query: 61  SGVPVKVQLLGQDPHWMAENAIRAAELGAYGIDLNFGCPAKMVNQSKGGAALLQHPELIY 120
           SG PV+VQ+LGQ+P WMAENA+RA  LG+ G+D NFGCPAKMVN+SKGGA LLQ+PELI+
Sbjct: 66  SGTPVRVQILGQEPGWMAENALRAVTLGSRGVDANFGCPAKMVNRSKGGAVLLQYPELIH 125

Query: 121 QVVKACRDAVPAHIPVSAKIRLGWEDPEDCFEIVDAVAQAKADELTVHARTKAGGYKASE 180
            +VKA R AVP+  PV+AKIRLG+ED     E   AV +A A EL +HAR+K  GYK   
Sbjct: 126 DIVKAMRQAVPSEQPVTAKIRLGYEDKSLFMENALAVYEAGATELAIHARSKVDGYKPPA 185

Query: 181 IKWHYIDQIRQKCSIPLIANGEVWNYADGQACIQTTGVDSLMVCRGALNVPNLGNVVKHN 240
             W YI ++R++  IP+IANGE+WN  D   C++ TG DS+M+ RGAL++PNL   +K  
Sbjct: 186 Y-WEYITEVRERLPIPVIANGEIWNRDDALRCMEVTGCDSIMIGRGALSMPNLAASIK-G 243

Query: 241 HAAMPWHEVVDLLLRYTQFEVRGDKGKYYPNRIKQWFAYLRHAYPQANELFGELRTLTQV 300
                W   + L++ Y++ E  G K  YYP RIKQWF+YL   YP+A++LF E+R     
Sbjct: 244 DTPYDWATTLRLMIHYSELETSGLKATYYPARIKQWFSYLSREYPEADDLFREIRIHKTT 303

Query: 301 EPIVDQL 307
           E I++ L
Sbjct: 304 EDILNGL 310