Pairwise Alignments

Query, 323 a.a., tRNA dihydrouridine(16) synthase DusC from Vibrio cholerae E7946 ATCC 55056

Subject, 362 a.a., Dihydrouridine synthase TIM-barrel protein nifR3 (NCBI) from Rhodospirillum rubrum S1H

 Score =  118 bits (296), Expect = 2e-31
 Identities = 83/242 (34%), Positives = 121/242 (50%), Gaps = 7/242 (2%)

Query: 3   VILGPMEGVLDHLMRDMLTQINDYDFCVTEFVRVVNLLLPDHVFYRLCPELQQGSKTPSG 62
           ++L PM GV D   R +    +DY   ++    V +  L       + P L  G++    
Sbjct: 14  IMLAPMAGVTDSPFRRLA---HDYGCPLSWTEMVASRELLRERARGVDPRLGGGAEAGRA 70

Query: 63  VPVKVQLLGQDPHWMAENAIRAAELGAYGIDLNFGCPAKMVNQSKGGAALLQHPELIYQV 122
            P  VQL G DP  MAE A R    GA  ID+N GCP + V    GG+AL++   L  ++
Sbjct: 71  GPFAVQLAGCDPLIMAEAARRVEGAGAELIDINMGCPVRKVVGGLGGSALMRDLPLAARI 130

Query: 123 VKACRDAVPAHIPVSAKIRLGWED-PEDCFEIVDAVAQAKADELTVHARTKAGGYKASEI 181
           ++A   AV   +PVS K+RLGW+D   +  E+      A    LTVH RT+A  Y     
Sbjct: 131 LEAVVGAVT--LPVSLKMRLGWDDASRNAVELARLAESAGISRLTVHGRTRAQMYD-GRA 187

Query: 182 KWHYIDQIRQKCSIPLIANGEVWNYADGQACIQTTGVDSLMVCRGALNVPNLGNVVKHNH 241
            W  I  +++  S+P+IANG+V N ++ +  +  TG D +M+ R AL  P L   +    
Sbjct: 188 DWPAIGLVKRAVSLPVIANGDVTNLSEAREILAVTGADGVMIGRAALGAPWLPGAIARAI 247

Query: 242 AA 243
           AA
Sbjct: 248 AA 249