Pairwise Alignments

Query, 323 a.a., tRNA dihydrouridine(16) synthase DusC from Vibrio cholerae E7946 ATCC 55056

Subject, 309 a.a., dihydrouridine synthase, DuS (RefSeq) from Shewanella loihica PV-4

 Score =  340 bits (872), Expect = 3e-98
 Identities = 167/307 (54%), Positives = 213/307 (69%), Gaps = 1/307 (0%)

Query: 1   MRVILGPMEGVLDHLMRDMLTQINDYDFCVTEFVRVVNLLLPDHVFYRLCPELQQGSKTP 60
           MRVIL PMEGV D  MR +LT +  YD  ++EF+RVV+ LLP+ VFYRLC EL+   +T 
Sbjct: 1   MRVILAPMEGVADAPMRALLTSVGGYDMVISEFIRVVDQLLPEKVFYRLCAELKYQCRTA 60

Query: 61  SGVPVKVQLLGQDPHWMAENAIRAAELGAYGIDLNFGCPAKMVNQSKGGAALLQHPELIY 120
           SG PV++QLLGQ+P+WMAENAIRA ELG+ G+DLN+GCPA MVN+SKGGAALL+ PE IY
Sbjct: 61  SGTPVRLQLLGQEPNWMAENAIRAVELGSRGVDLNYGCPAPMVNRSKGGAALLKEPETIY 120

Query: 121 QVVKACRDAVPAHIPVSAKIRLGWEDPEDCFEIVDAVAQAKADELTVHARTKAGGYKASE 180
           +V +A R AVP   PVSAKIRLGW+D   C EI  A+  A A ELTVHARTK   Y+   
Sbjct: 121 RVTQAVRQAVPKDKPVSAKIRLGWDDKSRCTEIAQAIEAAGATELTVHARTKEEAYR-PP 179

Query: 181 IKWHYIDQIRQKCSIPLIANGEVWNYADGQACIQTTGVDSLMVCRGALNVPNLGNVVKHN 240
             W YI QI+    +P+IANGE+W   D   C + +G D +M+ RGAL +PNL +VVK  
Sbjct: 180 AHWEYIAQIKSVTRLPIIANGEIWGREDYLKCREASGCDDVMLGRGALTIPNLAHVVKGE 239

Query: 241 HAAMPWHEVVDLLLRYTQFEVRGDKGKYYPNRIKQWFAYLRHAYPQANELFGELRTLTQV 300
              MPW EV+ LLL+Y++FE+  +K KYYP RIKQW  ++   Y +   LF ++R L   
Sbjct: 240 QTPMPWPEVLALLLQYSEFEIVSEKEKYYPARIKQWLRFIARHYEEGEALFRQVRVLKDT 299

Query: 301 EPIVDQL 307
           + I+  L
Sbjct: 300 QSILSLL 306