Pairwise Alignments

Query, 323 a.a., tRNA dihydrouridine(16) synthase DusC from Vibrio cholerae E7946 ATCC 55056

Subject, 322 a.a., nifR3 family TIM-barrel protein (RefSeq) from Shewanella loihica PV-4

 Score =  109 bits (273), Expect = 8e-29
 Identities = 65/174 (37%), Positives = 96/174 (55%), Gaps = 4/174 (2%)

Query: 67  VQLLGQDPHWMAENAIRAAELGAYGIDLNFGCPAKMVNQSKGGAALLQHPELIYQVVKAC 126
           VQ+ G DP  MA  A+   + GA  ID+N GCPAK VN+   G+ALLQ PEL+  +++A 
Sbjct: 69  VQIAGADPDMMAHAALVNVQQGAQIIDINMGCPAKKVNKKLAGSALLQQPELVKAILQAV 128

Query: 127 RDAVPAHIPVSAKIRLGW-EDPEDCFEIVDAVAQAKADELTVHARTKAGGYKASEIKWHY 185
             AV   +PV+ KIR GW  +  +   I           L VH RT+   YK  + ++  
Sbjct: 129 VAAV--DVPVTLKIRTGWAPEHRNGVHIAQIAQDCGIASLAVHGRTRQCMYK-GDAEYDT 185

Query: 186 IDQIRQKCSIPLIANGEVWNYADGQACIQTTGVDSLMVCRGALNVPNLGNVVKH 239
           I  I+Q  SIP++ANG++      ++ +  TG D++M+ RGA   P L   ++H
Sbjct: 186 IRAIKQNVSIPVVANGDICTPEKARSVLDYTGADAVMIGRGAQGRPWLFREIQH 239