Pairwise Alignments

Query, 323 a.a., tRNA dihydrouridine(16) synthase DusC from Vibrio cholerae E7946 ATCC 55056

Subject, 383 a.a., dihydrouridine synthase DuS (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 90.5 bits (223), Expect = 6e-23
 Identities = 73/234 (31%), Positives = 108/234 (46%), Gaps = 15/234 (6%)

Query: 2   RVILGPMEGVLDHLMRDMLTQINDYDFCVTEFVRVVNL-LLPDHVFYRLCPELQQGSKTP 60
           R+ L PM G+     R++   + DY  C   F  + N   +P        PE  +     
Sbjct: 48  RLWLAPMAGLGHAAFREV---VEDYGGCGLLFTGMCNARAVPTER-----PEKSEAFSWR 99

Query: 61  SGVPVKV--QLLGQDPHWMAENAIRAAELGAYGIDLNFGCPAKMVNQSKGGAALLQHPEL 118
           +G P ++  QL G +P  MAE A R    G +G+DLN GC    + +   GA LL+ PE 
Sbjct: 100 AGEPPRLVCQLFGAEPEHMAEGARRVQAEGFFGVDLNMGCSVSAIIKRGCGADLLRDPER 159

Query: 119 IYQVVKACRDAVPAHIPVSAKIRLGWE-DPEDCFEIVDAVAQAKADELTVHARTKAGGYK 177
             ++V A R AV   IPV  K R GW  DP+   ++      A AD L  H R  A   +
Sbjct: 160 AVRMVAAVRRAV--DIPVFVKFRTGWSPDPQPAVDLARRFEDAGADCLVFHPRV-APDRR 216

Query: 178 ASEIKWHYIDQIRQKCSIPLIANGEVWNYADGQACIQTTGVDSLMVCRGALNVP 231
               +  +I  ++   SIP++ NG+V+   D    +  TG D + + R A+  P
Sbjct: 217 TQPPRRAHIGLVKAAVSIPVMGNGDVFTPEDCANLLDDTGCDGVSLGRIAVARP 270