Pairwise Alignments

Query, 323 a.a., tRNA dihydrouridine(16) synthase DusC from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., TIM-barrel protein, yjbN family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 64.3 bits (155), Expect = 4e-15
 Identities = 41/111 (36%), Positives = 59/111 (53%), Gaps = 7/111 (6%)

Query: 64  PVKVQLLGQDPHWMAENAIRAAELGAYGIDLNFGCPAKMVNQSKGGAALLQHPELIYQVV 123
           P+ +QL G +P  +A  A  AAE G   ++LN GCP+  V   + GA L+  PEL+ + V
Sbjct: 68  PLALQLGGSNPVELARCAKLAAERGYDEVNLNVGCPSDRVQNGRFGACLMAEPELVAECV 127

Query: 124 KACRDAVPAHIPVSAKIRLGWEDPEDCFE----IVDAVAQAKADELTVHAR 170
            A +  V   IPV+ K R+G  D +D +E     +D V      E  +HAR
Sbjct: 128 DAMKQVV--DIPVTVKTRIG-IDEQDSYEFLTHFIDTVMAKGCGEFIIHAR 175