Pairwise Alignments

Query, 323 a.a., tRNA dihydrouridine(16) synthase DusC from Vibrio cholerae E7946 ATCC 55056

Subject, 332 a.a., dihydrouridine synthase family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 95.9 bits (237), Expect = 1e-24
 Identities = 72/234 (30%), Positives = 108/234 (46%), Gaps = 12/234 (5%)

Query: 68  QLLGQDPHWMAENAIRAAELGAYGIDLNFGCPAKMVNQSKGGAALLQHPELIYQVVKACR 127
           QL G DP  MAE A R    G +G+D+N GC    + +   GA LL+  E   ++V++ R
Sbjct: 72  QLFGADPSEMAEAARRVEAEGFFGVDINMGCSVAAIVRRGCGADLLRDEERAVRMVESVR 131

Query: 128 DAVPAHIPVSAKIRLGWE-DPEDCFEIVDAVAQAKADELTVHARTKAGGYKASEIKWHYI 186
            AV    PV  K R GW  DP+    +      A AD L  H R          ++ H+I
Sbjct: 132 RAVDC--PVLVKFRTGWSPDPQGAVALARRFEDAGADALVFHPRVAPDRRTRPPLR-HHI 188

Query: 187 DQIRQKCSIPLIANGEVWNYADGQACIQTTGVDSLMVCRGALNVPNL----GNVVKHNHA 242
             +++  +IP++ NGEV+   D  + ++TTG D + + R AL  P +      +V  N A
Sbjct: 189 RLVKEAVAIPVLGNGEVFTPGDAASMLETTGCDGISLGRIALGRPWVFAAWTGLVDDNPA 248

Query: 243 AMP--WHEVVDLLLRYTQFEVRGDKGKYYPNRIKQWFAYLRHAYPQANELFGEL 294
           + P  W ++   LL     E R    KY     K++  Y    +   N L G +
Sbjct: 249 SNPDLWRDIPLALL--DALERRHADRKYAARLFKKFLLYFIANFTYGNSLRGPM 300