Pairwise Alignments

Query, 323 a.a., tRNA dihydrouridine(16) synthase DusC from Vibrio cholerae E7946 ATCC 55056

Subject, 314 a.a., putative nifR3 family TIM-barrel enzyme with dihydrouridine synthase domain (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 82.8 bits (203), Expect = 1e-20
 Identities = 51/163 (31%), Positives = 77/163 (47%), Gaps = 8/163 (4%)

Query: 86  ELGAYGIDLNFGCPAKMVNQSKGGAALLQHPELIYQVVKACRDAVPAH--IPVSAKIRLG 143
           E G   +D+N GCP  ++ +   G+ +L +PE     VKA    V  +  I  S K+RLG
Sbjct: 85  EKGYQEVDINLGCPFPLLAKRHNGSGILPYPE----EVKALLSIVTRYPQISFSVKMRLG 140

Query: 144 WEDPEDCFEIVDAVAQAKADELTVHARTKAGGYKASEIKWHYIDQIRQKCSIPLIANGEV 203
           WE P++C  +   +      ++T+H R    GYK  E+        R+ C +PL+ NG++
Sbjct: 141 WEQPDECLALAPILNDLPLRQITMHPRLGKQGYK-GEVDLQGFSAFREVCQLPLVYNGDI 199

Query: 204 WNYADGQ-ACIQTTGVDSLMVCRGALNVPNLGNVVKHNHAAMP 245
            N  D Q    Q   +  +M+ RG L  P L    K N    P
Sbjct: 200 HNLEDIQRISTQFPSLAGIMIGRGLLANPALALEYKENRTLAP 242