Pairwise Alignments

Query, 323 a.a., tRNA dihydrouridine(16) synthase DusC from Vibrio cholerae E7946 ATCC 55056

Subject, 322 a.a., nifR3 family TIM-barrel protein (RefSeq) from Shewanella sp. ANA-3

 Score =  113 bits (282), Expect = 7e-30
 Identities = 77/240 (32%), Positives = 127/240 (52%), Gaps = 13/240 (5%)

Query: 2   RVILGPMEGVLDHLMRDMLTQINDYDFCVTEFVRV-VNLLLPDHVFYRLCPELQQGSKTP 60
           ++I+ PM GV D   R++  +       V+E +     +   D    R+    ++G ++ 
Sbjct: 11  QLIVAPMAGVTDQAFRNLCLRYGAA-LAVSEMLSSNPEVWDTDKSRQRMTHSGEEGIRS- 68

Query: 61  SGVPVKVQLLGQDPHWMAENAIRAAELGAYGIDLNFGCPAKMVNQSKGGAALLQHPELIY 120
                 VQ+ G DP  MA+ A    E GA+ ID+N GCPAK VN+   G+AL+Q+P L+ 
Sbjct: 69  ------VQIAGADPELMAQAAQFNVEQGAHIIDINMGCPAKKVNKKLAGSALMQNPPLVK 122

Query: 121 QVVKACRDAVPAHIPVSAKIRLGWE-DPEDCFEIVDAVAQAKADELTVHARTKAGGYKAS 179
           ++++A   AV   +PV+ KIR GWE +  +  +I           L VH RT+   Y+  
Sbjct: 123 EILQAVVAAV--EVPVTLKIRTGWEPEHRNGVQIAQIAEDCGIASLAVHGRTRQCMYR-G 179

Query: 180 EIKWHYIDQIRQKCSIPLIANGEVWNYADGQACIQTTGVDSLMVCRGALNVPNLGNVVKH 239
           + ++  I  I+Q  SIP++ANG++ +    +  +  TGVD+LM+ RGA   P +   ++H
Sbjct: 180 DAEYDTIKAIKQNVSIPVVANGDIDSPEKARFVLDYTGVDALMIGRGAQGRPWIFREIQH 239