Pairwise Alignments

Query, 489 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 886 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score = 90.9 bits (224), Expect = 2e-22
 Identities = 65/166 (39%), Positives = 90/166 (54%), Gaps = 13/166 (7%)

Query: 334 LAARDPMTGLLNRRGM-----ESFLKGKRHSQYLAIAVLDIDDFKQINDAYGHDMGDRVI 388
           LA  DP+TGL NRR +     ++   G R  Q  A+  +D+D+FK IND +GH  GD+V+
Sbjct: 446 LAFYDPLTGLPNRRLLLDRLQQAMAAGCRSGQLGALMFIDLDNFKNINDLHGHQTGDQVL 505

Query: 389 CYIGEQIENHIRSSDAVARFGGEEFVVYV----TAKE--KEQITRIMQRIFDAVCRESPL 442
               E+++  IR+SD VAR GG+EFVV +     A E    Q   I  ++  ++ +   L
Sbjct: 506 RIAAERLQGEIRASDTVARLGGDEFVVMLENLGDAPELAATQAEHIGMKLLGSLGKPYRL 565

Query: 443 ILEPGFTISGGIEVVESTTDRSFED-LFKAADEKLYVAKTSGKNQL 487
             + G   S  I VV   TD S  D L K AD  +Y AK +GKN L
Sbjct: 566 -NDLGLYSSASIGVVLFGTDGSSSDELMKRADMSMYEAKVAGKNAL 610