Pairwise Alignments

Query, 489 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 1099 a.a., diguanylate cyclase (GGDEF domain) with PAS/PAC and GAF sensors from Synechococcus elongatus PCC 7942

 Score =  100 bits (250), Expect = 2e-25
 Identities = 63/172 (36%), Positives = 90/172 (52%), Gaps = 15/172 (8%)

Query: 328  RQHYAQLAARDPMTGLLNRRGMESFL-----KGKRHSQYLAIAVLDIDDFKQINDAYGHD 382
            R+   Q   RDP+TGL NRR ++ F      + KR    + I +LDID FK+ ND +GHD
Sbjct: 902  RETLRQENLRDPLTGLFNRRYLQEFFEQELARAKRSGDSIGILMLDIDYFKRFNDEFGHD 961

Query: 383  MGDRVICYIGEQIENHIRSSDAVARFGGEEFVVYVTAKEKEQITRIMQRIFDAVCRESPL 442
             GD V+  +   + N +R+SD V RFGGEE  + +     E   R   +I  A+ +   L
Sbjct: 962  AGDMVLKQVARALLNQVRASDVVCRFGGEEIAILMPGASLEVSARKADQIRQAIAQ---L 1018

Query: 443  ILE------PGFTISGGIEVVESTTDRSFEDLFKAADEKLYVAKTSGKNQLV 488
            I+       P  TIS G+     +   S + L K+AD  LY AK +G+N +V
Sbjct: 1019 IISYHEQTLPSLTISIGVAAFPESGLAS-DTLIKSADTSLYQAKAAGRNCVV 1069