Pairwise Alignments

Query, 489 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 288 a.a., GGDEF domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  107 bits (267), Expect = 5e-28
 Identities = 71/179 (39%), Positives = 98/179 (54%), Gaps = 9/179 (5%)

Query: 313 LFLTGVLIYLNTRWDRQHYAQ-LAARDPMTGLLNRRGMESFLKGKRHSQYLAIAVLDIDD 371
           L  TG+L+  + +  +Q   + +AA DP+TG LNRR   +F   K HS     A++D+D 
Sbjct: 111 LSATGLLLLFHHQLVQQSLLKKIAATDPLTGALNRR---AFKAPKTHSGSTVFALVDVDH 167

Query: 372 FKQINDAYGHDMGDRVICYIGEQIENHIRSSDAVARFGGEEFVVYVTAKEKEQITRIMQR 431
           FK+IND YGHD GD V+  + + I NHIR  D   R+GGEEF++     E  Q ++ M+ 
Sbjct: 168 FKRINDTYGHDAGDFVLVELAKLISNHIREDDQFFRWGGEEFLLEFRQAELAQASKRMEA 227

Query: 432 IFDAVCRESPLILEP---GFTISGGIEVVESTTDRSFEDLFKAADEKLYVAKTSGKNQL 487
           +   V   S   L       TIS G+  V S      E   KAADE LY AK SG+N++
Sbjct: 228 LRQLV-ESSHFNLNGQAINITISAGLTCV-SPNHGGLEKALKAADEALYRAKDSGRNRI 284