Pairwise Alignments

Query, 489 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 485 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 97.8 bits (242), Expect = 7e-25
 Identities = 66/226 (29%), Positives = 111/226 (49%), Gaps = 9/226 (3%)

Query: 268 YRPHKLTSEYADYHQVVFYKLDIQSELSNFLTEKSGNLLVVALVYLFLTGVLIYLNTRWD 327
           Y   +L  E+  Y  V       + EL N         LVV +  LF++ + +    R+ 
Sbjct: 261 YLNSRLVPEFKWYLVVEQEDAPQEQELLNTFWGNLALSLVVTIGILFISNMTL---GRYQ 317

Query: 328 RQHYAQLAARDPMTGLLNRRGMESFL-----KGKRHSQYLAIAVLDIDDFKQINDAYGHD 382
           R+    +A+ D +TG  NR+  E +      K K     ++I ++DID FK++ND+YGH 
Sbjct: 318 RK-LEIMASTDKLTGAANRQVFEEYFHQALDKAKLSQTSISILLIDIDHFKKVNDSYGHS 376

Query: 383 MGDRVICYIGEQIENHIRSSDAVARFGGEEFVVYVTAKEKEQITRIMQRIFDAVCRESPL 442
           +GD V+  +   + + ++  D + R+GGEEF+V +   +  +   + +R  D++ +    
Sbjct: 377 VGDLVLKTVTNLLRSQLKPQDILCRWGGEEFLVLLPEMDLSRAAELAERFRDSISQRELK 436

Query: 443 ILEPGFTISGGIEVVESTTDRSFEDLFKAADEKLYVAKTSGKNQLV 488
           +      I+  I V E       EDL K AD  LY AK +G+NQ+V
Sbjct: 437 VNGVHIAITVSIGVAEYQKLEPAEDLIKRADLALYQAKEAGRNQVV 482