Pairwise Alignments

Query, 327 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 331 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score = 73.9 bits (180), Expect = 5e-18
 Identities = 70/263 (26%), Positives = 117/263 (44%), Gaps = 18/263 (6%)

Query: 47  DLSVDGSFPMGAAVAATAIVA-GINPWVATGLAILAGAATGWVTAFLSVRCGILHLLASI 105
           DLSV       A V A  I + G+ P  A+ LA+L G   G +  FL  R G+  L+ ++
Sbjct: 84  DLSVGSGVAFVALVLALTIDSLGVLP--ASVLAMLVGVGIGLINGFLVTRIGVNALITTL 141

Query: 106 LTMIAAFSINIRIMGRPNLALLGEDTILTPFEALGDPVLIRPLVVAVLVVISALLVIRLL 165
            T+     +   I G  N+ +   D       A+  P L  PL   V ++++ ++ I L 
Sbjct: 142 GTLAIFRGLTQSIGGGRNIPIANFDW------AIWRPFLNIPLSALVFLLVAIMVGIVLK 195

Query: 166 NSDFGLGLRATGVNARMVAAQGASTAFYTYFCLALSNGFVGFAGALFAQTNSFADVTSGV 225
            S FG  + A G N       G  T    +    LS  F+G  G + A        T+G+
Sbjct: 196 RSVFGRSIYAIGANENAARLVGIRTKGVVFAGFLLSGAFIGLGGLISASQLGSTSGTTGL 255

Query: 226 GTIVVGLAAVILGQTLIPGRKIWVAVVAVIVGSVLYRLAVAFALSSG--MFGLQASDLNL 283
           G  +  + AVILG T + G          ++G+V+  L V   L++G  +  + +S    
Sbjct: 256 GLELAVVTAVILGGTSLKGG------TGTMLGTVIGLLIVG-VLNNGLTLMNVNSSWQQA 308

Query: 284 VTAVLVALALIMPKIKRNLKSKK 306
            T +L+ LA+   ++++ L  ++
Sbjct: 309 ATGLLLILAVSFDQLRQRLVGRR 331