Pairwise Alignments

Query, 321 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 323 a.a., Protein of unknown function DUF534 (NCBI) from Rhodospirillum rubrum S1H

 Score =  278 bits (712), Expect = 1e-79
 Identities = 146/318 (45%), Positives = 210/318 (66%), Gaps = 1/318 (0%)

Query: 1   MRAGKVIATAVLAGAALLS-SQSIMAKTAKVAVSQIVEHPALDATRQGLLDGLKAKGYEE 59
           MR   VIA A      L   SQ+  A    VAV+QIVEHPALDA R+G+ + L   G++ 
Sbjct: 1   MRPLSVIAAACALALGLAPVSQAGAADVKHVAVTQIVEHPALDAAREGVREALAEAGWKV 60

Query: 60  GKNLEFDYKTAQGNPAIAVQIARQFVGENPDVLVGIATPTAQALVSATKTIPIVFTAVTD 119
           G+NL + +++AQG+   A QIA++FVG  PDV+V IATP+AQ  V++   IP++F+AVTD
Sbjct: 61  GENLTWTFESAQGSVGTAAQIAKKFVGLQPDVIVAIATPSAQTAVASANGIPVIFSAVTD 120

Query: 120 PVGAKLVKQLEQPGKNVTGLSDLSPVEQHVELIKEILPNVKSIGVVYNPGEANAVSLMEL 179
           PVGA+LV+ LE PG  VTG SD+ P+  H+ +I+  LP  K++GV+YN GEAN+V+L+E 
Sbjct: 121 PVGARLVRSLENPGVPVTGSSDMLPLPLHLAMIRRALPQSKTVGVLYNAGEANSVALVET 180

Query: 180 LKLSAAKHGIKLVEATALKSADVQSATQAIAEKSDVIYALIDNTVASAIEGMIVAANQAK 239
           LK  A   G  +VE+TA +S+DV  A + +  K D IY   DNTV SA+E ++      K
Sbjct: 181 LKTVAPAQGFTIVESTAPRSSDVLGAARNLVGKVDAIYVPTDNTVISALEAVVKVGIDNK 240

Query: 240 TPVFGAATSYVERGAIASLGFDYYQIGVQTADYVAAILEGKEPGSLDVQVAKGSDLVINK 299
            PVF   T+ V RGA+A+ GFDY+ +G+QT   VA +L G +P ++ V+  + +DL +N 
Sbjct: 241 LPVFAGDTASVARGAVAATGFDYHDLGLQTGRMVARVLAGADPRTMPVETIQKTDLYVNP 300

Query: 300 TAAEQLGITIPEAVLARA 317
             AE++G+T+P  ++A A
Sbjct: 301 AMAERMGLTLPPDMIADA 318