Pairwise Alignments

Query, 321 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 329 a.a., ABC-type uncharacterized transport system, periplasmic component from Dechlorosoma suillum PS

 Score = 57.4 bits (137), Expect = 5e-13
 Identities = 52/233 (22%), Positives = 107/233 (45%), Gaps = 11/233 (4%)

Query: 91  VLVGIATPTAQALVSATKTIPIVFTAVTDPVGAKLVKQL---EQPGKNVTGLSDLSPVEQ 147
           +++ +    A+AL     T P++   V      ++  +     +PG + + L    P+ +
Sbjct: 94  LVLAVGAGAARALARMEGTPPVLSVLVPRLTFERIAAESGRRARPG-SFSALYLDQPLSR 152

Query: 148 HVELIKEILPNVKSIGVVYNPGEANAVSLMELLKLSAAKHGIKLVEATALKSADVQSATQ 207
            + L++  LP  K +  +  P  A   +L   L+ + ++ G +L      +  D+  A  
Sbjct: 153 QLNLLRFALPGRKRVAALLGPESA---ALAPRLRSAVSRAGFELQMEQVAEEGDIVPALN 209

Query: 208 AIAEKSDVIYALIDNTV--ASAIEGMIVAANQAKTPVFGAATSYVERGAIASLGFDYYQI 265
            +   +DV+ AL D  V   +    +++   + + PV G + +YV  GA+A++     Q+
Sbjct: 210 RLLPATDVLLALPDGLVFNRNTARPVLLTTYRHQRPVVGFSQAYVTAGALAAVFSTPAQM 269

Query: 266 GVQTADYVAAILEGKEPGSLDVQVAKGSDLVINKTAAEQLGITIP-EAVLARA 317
           G QTA+++  +  G+      +  +  S + +N+  A  LG+ +P E VL  A
Sbjct: 270 GRQTAEFLRGLPAGRVTLGAPLYPSYFS-VAVNRNVARSLGLDLPDEGVLREA 321