Pairwise Alignments

Query, 336 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 323 a.a., Peptide ABC transporter, ATP-binding protein from Pseudomonas fluorescens FW300-N2E2

 Score =  278 bits (711), Expect = 1e-79
 Identities = 150/322 (46%), Positives = 210/322 (65%), Gaps = 4/322 (1%)

Query: 14  LLDVKDLKVHFNITPKSAWPWTKPVTLKAVDGVNVRLYEGETLGVVGESGCGKSTFARAI 73
           LL VKDL+V F   P S         +KAV+GV++ L  GE LG+VGESG GKST  RAI
Sbjct: 3   LLHVKDLQVRF-AAPGSGPFGIHRQWVKAVNGVSLSLAPGEVLGLVGESGSGKSTLGRAI 61

Query: 74  IGLVQATHGEVVWLGQDLTRMQEVKRRATRKQIQMIFQDPLASLNPRMTVGDIIAEPLQT 133
           + L + + G++++ G D+ + + +     R +  MIFQDP  +LNPRM++GD +AE L+ 
Sbjct: 62  LRLTEVSAGQILFDGVDMAQGKRIDIERLRHETAMIFQDPYTALNPRMSIGDTLAEVLRV 121

Query: 134 FYPELSKQEVKDRVKEMMAKVGLLPNVINRYPHEFSGGQCQRIGIARALILKPKMIICDE 193
               +    ++ RV E++  VGL P + +R P   SGGQCQR+GIARAL ++P++II DE
Sbjct: 122 RCA-IPASLIRQRVDELLNLVGLRPELADRKPGSLSGGQCQRVGIARALAIEPRLIIADE 180

Query: 194 PVSALDVSIQAQVVNLLKELQKELGLSLVFIAHDLSVVKHISDRVLVMYLGNAVELGVSK 253
            V+ALDVSIQ Q++NLL EL++ + L+++FIAHDL++V+ + DRV VMYLG  VE G ++
Sbjct: 181 CVAALDVSIQGQIINLLLELRQRMNLAILFIAHDLAIVRRLCDRVAVMYLGEIVEQGPTE 240

Query: 254 ELFANPKHPYTKALMSAVPIPDPNIERNKTIQMLEGDLPSPMNPPSGCVFRTRCPQATAE 313
            +F+NP+HPYT AL+ ++P  DP   R      L G+ PSP+N PSGC F  RC  A   
Sbjct: 241 AVFSNPRHPYTVALIQSIPHIDPT--RPLLSAPLPGEPPSPLNLPSGCAFHPRCRYAQPI 298

Query: 314 CAKTKPVIKGSDIHSVSCLYAE 335
           CAKT P I   + H  SC+  E
Sbjct: 299 CAKTPPPIHDINGHRYSCVLGE 320