Pairwise Alignments

Query, 336 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 377 a.a., Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal from Pseudomonas syringae pv. syringae B728a

 Score =  300 bits (768), Expect = 4e-86
 Identities = 156/312 (50%), Positives = 218/312 (69%), Gaps = 5/312 (1%)

Query: 11  KKLLLDVKDLKVHFNITPKSAWPWTKPVTLKAVDGVNVRLYEGETLGVVGESGCGKSTFA 70
           +K +L+   L  HF +  +S     K   ++AV+ VN+ + +GETL +VGESG GKST  
Sbjct: 19  QKPILEGIGLSKHFAV--ESGLLQRKKPPVQAVNEVNLSVRKGETLALVGESGSGKSTLG 76

Query: 71  RAIIGLVQATHGEVVWLGQDLTRMQEVKRRATRKQIQMIFQDPLASLNPRMTVGDIIAEP 130
           R ++ L+Q T G+V++ G++L  +   K R  R+ +Q+IFQDP ASLNPRMTV  I+ EP
Sbjct: 77  RLLLNLLQPTAGDVIYEGRNLANLTPEKLRQVRRDLQIIFQDPFASLNPRMTVESIVGEP 136

Query: 131 LQTFYPELSKQEVKDRVKEMMAKVGLLPNVINRYPHEFSGGQCQRIGIARALILKPKMII 190
           +   + + S+ + ++RV E++  VGL P    R+PHEFSGGQ QRIGIARAL  +P++I+
Sbjct: 137 IW-LHSQASRSDRQERVAELLRTVGLAPEHGGRHPHEFSGGQRQRIGIARALASEPRLIL 195

Query: 191 CDEPVSALDVSIQAQVVNLLKELQKELGLSLVFIAHDLSVVKHISDRVLVMYLGNAVELG 250
            DEPVSALDVS+QAQVVNLL++L+ + GL+LV +AH L+V++H+SDRV VMYLG  VE  
Sbjct: 196 GDEPVSALDVSVQAQVVNLLEDLKHQFGLTLVIVAHGLAVIRHMSDRVAVMYLGEIVEQA 255

Query: 251 VSKELFANPKHPYTKALMSAVPIPDPNIERNKTIQMLEGDLPSPMNPPSGCVFRTRCPQA 310
               LF NP HPYT+ALM+AVP+  P++ + +   +L GD+PSP  PPSGC F TRCP A
Sbjct: 256 PVDALFENPLHPYTQALMAAVPVSHPDLRQPR--PLLGGDMPSPSRPPSGCRFHTRCPHA 313

Query: 311 TAECAKTKPVIK 322
            A C +  PV++
Sbjct: 314 RALCKEAAPVME 325