Pairwise Alignments

Query, 336 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 337 a.a., Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal from Pseudomonas syringae pv. syringae B728a

 Score =  268 bits (686), Expect = 1e-76
 Identities = 140/297 (47%), Positives = 196/297 (65%), Gaps = 6/297 (2%)

Query: 36  KPVTLKAVDGVNVRLYEGETLGVVGESGCGKSTFARAIIGLVQATHGEVVWLGQDLTRMQ 95
           KP+T  AVD V++R+  GE +G+VGESGCGKST  R + GL+  + G     G+ L  + 
Sbjct: 40  KPLT-HAVDRVDLRIARGEVVGLVGESGCGKSTLGRMVAGLLPVSSGTTSVDGKPLESLT 98

Query: 96  EVKRRATRKQIQMIFQDPLASLNPRMTVGDIIAEPLQTFYPELSKQEVKDRVKEMMAKVG 155
             +R+A R ++QMIFQDP +SLNPR+ V  I+ E     +    ++   D V   + + G
Sbjct: 99  PQERKALRLKVQMIFQDPSSSLNPRLRVDRIVGEGA-LLHGLTDRKGADDYVSAQLQRAG 157

Query: 156 LLPNVINRYPHEFSGGQCQRIGIARALILKPKMIICDEPVSALDVSIQAQVVNLLKELQK 215
           L P +  RYPH+FSGGQ QRIGIARAL ++P++++CDE V+ALDVSIQAQ++NL  +L+ 
Sbjct: 158 LSPQLRQRYPHQFSGGQRQRIGIARALAVQPELLVCDESVAALDVSIQAQILNLFMDLRD 217

Query: 216 ELGLSLVFIAHDLSVVKHISDRVLVMYLGNAVELGVSKELFANPKHPYTKALMSAVPIPD 275
           ELGL+ +FI+HDL VV+H+ DRV+VMYLG  VE     +LFA   HPYT+AL++ +P  D
Sbjct: 218 ELGLTYLFISHDLGVVEHLCDRVIVMYLGRVVETASVDDLFARANHPYTQALLAQIPRFD 277

Query: 276 PNIERNKTIQMLEGDLPSPMNPPSGCVFRTRCPQATAECAKTKPVIKG-SDIHSVSC 331
               R   IQ   G++PSP++PP+GC F  RCP A A C +  P ++  S  H  +C
Sbjct: 278 IRSTRYDAIQ---GEIPSPLDPPAGCHFHPRCPHAMARCREEVPALREVSPNHQSAC 331