Pairwise Alignments

Query, 336 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 340 a.a., Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal from Pseudomonas syringae pv. syringae B728a

 Score =  276 bits (705), Expect = 7e-79
 Identities = 149/324 (45%), Positives = 214/324 (66%), Gaps = 9/324 (2%)

Query: 8   SVEKKLLLDVKDLKVHFNITPKSAWPWTKPVTLKAVDGVNVRLYEGETLGVVGESGCGKS 67
           SV+K + L++ D++  F+I+     P     TLKAVDGV++RL  GETLG+VGESGCGKS
Sbjct: 12  SVKKDIALELCDIRREFSISRGFFKP---DATLKAVDGVSLRLMRGETLGLVGESGCGKS 68

Query: 68  TFARAIIGLVQATHGEVVWLGQDLTRMQEVKRRATRKQIQMIFQDPLASLNPRMTVGDII 127
           T A+ ++GL+  + G+V+  G+ L       R+   ++IQ IFQDP +SLNPR T+ +I+
Sbjct: 69  TLAKMLLGLLAPSSGDVLVNGKHLAGTD---RKEMARRIQPIFQDPYSSLNPRKTLREIV 125

Query: 128 AEPLQTFYPELSKQEVKDRVKEMMAKVGLLPNVINRYPHEFSGGQCQRIGIARALILKPK 187
             PL   +   +  E + R + MM  VGL   VI+ YP + SGGQ QR+ IARAL+++P 
Sbjct: 126 TLPL-IVHGIGTPAERRQRAEAMMDVVGLPKRVIDSYPSQLSGGQRQRVAIARALVMRPD 184

Query: 188 MIICDEPVSALDVSIQAQVVNLLKELQKELGLSLVFIAHDLSVVKHISDRVLVMYLGNAV 247
           ++ICDEP SALDVS+QAQ++NLL++L++E GL+ + I+H+L+V++H++DRV VMYLG  V
Sbjct: 185 VLICDEPTSALDVSVQAQILNLLQDLKQEFGLTYLLISHNLAVIEHLADRVAVMYLGRIV 244

Query: 248 ELGVSKELFANPKHPYTKALMSAVPIPDPNIERNKTIQMLEGDLPSPMNPPSGCVFRTRC 307
           E    + LFA P HPYT+AL+ +V  PDP++        L G  P+PM+PPSGC F  RC
Sbjct: 245 EERSRESLFARPGHPYTQALLDSVLTPDPHL--GIPDLGLHGTFPNPMSPPSGCAFHPRC 302

Query: 308 PQATAECAKTKPVIKGSDIHSVSC 331
           P     C +  P I   +  +V C
Sbjct: 303 PACMPVCKEKAPAIGRMEGGTVRC 326