Pairwise Alignments

Query, 336 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 593 a.a., peptide transport ATP-binding ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  257 bits (657), Expect = 5e-73
 Identities = 141/283 (49%), Positives = 197/283 (69%), Gaps = 7/283 (2%)

Query: 14  LLDVKDLKVHFNITPKSAWPWTKPVT-LKAVDGVNVRLYEGETLGVVGESGCGKSTFARA 72
           +L V++L V F+I         +PV  L AV+G+++ +  GETL +VGESGCGKST  +A
Sbjct: 293 MLQVENLTVRFDI---KGGILQRPVRRLHAVEGISLSVRRGETLSLVGESGCGKSTTGKA 349

Query: 73  IIGLVQATHGEVVWLGQDLTRMQEVKRRATRKQIQMIFQDPLASLNPRMTVGDIIAEPLQ 132
           ++ LV  T G++   G+    ++    R   + +QMIFQDP ASL+PRM VGD++AEPL 
Sbjct: 350 LLNLVPWT-GDIRVDGRSTRGLRGSTMRPILRDVQMIFQDPYASLDPRMRVGDLVAEPL- 407

Query: 133 TFYPELSKQEVKDRVKEMMAKVGLLPNVINRYPHEFSGGQCQRIGIARALILKPKMIICD 192
             +   S  E++DRV+ +  +VGL P  + RYPHEFSGGQ QRI IARAL L PK+I+ D
Sbjct: 408 VIHGLASGSELRDRVEYLFKRVGLSPEQMKRYPHEFSGGQRQRICIARALSLSPKLIVAD 467

Query: 193 EPVSALDVSIQAQVVNLLKELQKELGLSLVFIAHDLSVVKHISDRVLVMYLGNAVELGVS 252
           E V+ALDVSIQAQV++LL+++Q E G+S +FI+HD++VV+ IS RV VMY+G  VE+G  
Sbjct: 468 ESVAALDVSIQAQVLDLLQDIQDETGVSYLFISHDMAVVEQISHRVAVMYMGRFVEMGTR 527

Query: 253 KELFANPKHPYTKALMSAVPIPDPNIERNKTIQMLEGDLPSPM 295
           +++F +P+HPYTK LM+AVP+ DP   R   +   E DLPSP+
Sbjct: 528 RQIFESPQHPYTKKLMAAVPVADPGRVRRDFVPKAE-DLPSPV 569



 Score =  168 bits (426), Expect = 3e-46
 Identities = 106/267 (39%), Positives = 158/267 (59%), Gaps = 17/267 (6%)

Query: 14  LLDVKDLKVHFNITPKSAWPWTKPVTLKAVDGVNVRLYEGETLGVVGESGCGKSTFARAI 73
           LL VKDL V    TP      T P  +  V+ ++  L  G TL + GESG GKS  A ++
Sbjct: 5   LLSVKDLTVQV-ATP------TGPKVV--VERLSFDLLPGRTLCLAGESGSGKSMTALSL 55

Query: 74  IGLV-----QATHGEVVWLGQDLTRMQEVKRRATR-KQIQMIFQDPLASLNPRMTVGDII 127
           + L+     +   G     G+D+  + E + R  R ++I MIFQ+P+ SLNP MTVG+ +
Sbjct: 56  MQLLPKPMARIAGGSATLDGEDILALPEARMRRIRGRKIGMIFQEPMTSLNPVMTVGNQL 115

Query: 128 AEPLQTFYPELSKQEVKDRVKEMMAKVGLLP--NVINRYPHEFSGGQCQRIGIARALILK 185
              +        ++  + R  E++ +V +      + +YPHE SGG  QRI IA AL   
Sbjct: 116 IGAITAHGNTSGRRAARARAAELLDQVQIPEPERRLGQYPHELSGGLRQRIVIAMALAQN 175

Query: 186 PKMIICDEPVSALDVSIQAQVVNLLKELQKELGLSLVFIAHDLSVVKHISDRVLVMYLGN 245
           PK++I DEP +ALDV++QAQ++ L+++LQ + G+S++ I HD+ VV  ++D VLVM  G 
Sbjct: 176 PKILIADEPTTALDVTVQAQILALIRKLQADHGISVIMITHDMGVVAEMADEVLVMKHGR 235

Query: 246 AVELGVSKELFANPKHPYTKALMSAVP 272
            VE   S++LFA+P+  YTK L+SAVP
Sbjct: 236 TVEHATSRDLFAHPQDAYTKELLSAVP 262