Pairwise Alignments

Query, 336 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 338 a.a., Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like (NCBI) from Rhodospirillum rubrum S1H

 Score =  396 bits (1017), Expect = e-115
 Identities = 194/323 (60%), Positives = 252/323 (78%), Gaps = 3/323 (0%)

Query: 14  LLDVKDLKVHFNITPKSAWPWTKPVTLKAVDGVNVRLYEGETLGVVGESGCGKSTFARAI 73
           +L V+DL+V F++ P+  +    PV LKAVDGV+  +  GETLG+VGESGCGKST  RA+
Sbjct: 11  ILSVRDLRVTFSLPPRRLFGG--PVALKAVDGVSFDVAAGETLGIVGESGCGKSTLGRAL 68

Query: 74  IGLVQATHGEVVWLGQDLTRMQEVKRRATRKQIQMIFQDPLASLNPRMTVGDIIAEPLQT 133
           + L+  T GEVVWLG+D+  ++    R  R+ +Q+IFQDPLASL+PRMT+GDIIAEPL T
Sbjct: 69  LQLIPPTSGEVVWLGRDIAGLRSRAMRPLRRDLQIIFQDPLASLDPRMTIGDIIAEPLIT 128

Query: 134 FYPELSKQEVKDRVKEMMAKVGLLPNVINRYPHEFSGGQCQRIGIARALILKPKMIICDE 193
            +PE++ + ++ RV+ MM +VGLLP ++NRYPHEFSGGQCQRIGIARA+IL+PK+I+CDE
Sbjct: 129 HHPEMTAETLRQRVRAMMDEVGLLPQMLNRYPHEFSGGQCQRIGIARAMILEPKLIVCDE 188

Query: 194 PVSALDVSIQAQVVNLLKELQKELGLSLVFIAHDLSVVKHISDRVLVMYLGNAVELGVSK 253
           PVSALDVSIQAQ+VNLL++LQK  GLSL+FI+HDLSVV+HIS R+LV+YLG  +E+    
Sbjct: 189 PVSALDVSIQAQIVNLLQDLQKRFGLSLLFISHDLSVVRHISHRILVLYLGRVMEIADRD 248

Query: 254 ELFANPKHPYTKALMSAVPIPDPNIERNKTIQMLEGDLPSPMNPPSGCVFRTRCPQATAE 313
            L+  P+HPYT+AL+SAVPI DP  ER K   +L GDLPSP++PPSGCVFRTRCP A A 
Sbjct: 249 GLYDRPRHPYTRALISAVPIADPRKEREKPRLILGGDLPSPIDPPSGCVFRTRCPFARAR 308

Query: 314 CAKTKPVIKGSDI-HSVSCLYAE 335
           CA   PV++ +   H  +C + E
Sbjct: 309 CANEVPVLRPTGPGHQAACHFFE 331