Pairwise Alignments

Query, 336 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 321 a.a., dipeptide transport ATP-binding protein DppF from Phaeobacter inhibens DSM 17395

 Score =  263 bits (671), Expect = 6e-75
 Identities = 144/330 (43%), Positives = 207/330 (62%), Gaps = 20/330 (6%)

Query: 14  LLDVKDLKVHFNITPKSAWPWTKPVT-------LKAVDGVNVRLYEGETLGVVGESGCGK 66
           ++ V +L   F+++     PW   V        L AV  V+  + E     +VGESG GK
Sbjct: 4   IVSVNELTRVFDVSK----PWLNRVLERLPKSHLTAVSDVSFDIKEKTVYSLVGESGSGK 59

Query: 67  STFARAIIGLVQATHGEVVWLGQDLTRMQE-VKRRATRKQIQMIFQDPLASLNPRMTVGD 125
           ST  + ++GL++ + G V   G DL R  + V     R  IQMIFQDP AS+NPR  V D
Sbjct: 60  STIGKMVVGLLENSSGAVKVSGVDLNRETDAVAITKARDAIQMIFQDPYASMNPRWRVRD 119

Query: 126 IIAEPLQTFYPELSKQEVKDRVKEMMAKVGLLPNVINRYPHEFSGGQCQRIGIARALILK 185
           IIAEP+          E K+  + ++ +VGL     +++PHEFSGGQ QRI IAR+L  +
Sbjct: 120 IIAEPVAA-----KGGETKELAERLLEQVGLSAEDADKFPHEFSGGQRQRICIARSLASQ 174

Query: 186 PKMIICDEPVSALDVSIQAQVVNLLKELQKELGLSLVFIAHDLSVVKHISDRVLVMYLGN 245
           P++I+CDEP SALDVS+QAQV+NL+ +L+ +LGL+ +FI+HDL+VV+HISDR+ V+YLG 
Sbjct: 175 PRLIVCDEPTSALDVSVQAQVLNLMSDLKDDLGLTYLFISHDLTVVRHISDRIGVLYLGR 234

Query: 246 AVELGVSKELFANPKHPYTKALMSAVPIPDPNIERNKTIQMLEGDLPSPMNPPSGCVFRT 305
            VE     +LF  PKHPYT+ L++A P  D      + ++  +G++P P+NPPSGC F  
Sbjct: 235 LVEEAAPDDLFEAPKHPYTQMLLAAAPKMD---AFGREVEPPQGEIPDPINPPSGCAFHP 291

Query: 306 RCPQATAECAKTKPVIKGSDIHSVSCLYAE 335
           RCP ATA+C++ +P ++  +   V+C  AE
Sbjct: 292 RCPIATAQCSQVRPQMRNINGSRVACHLAE 321